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BODC Cruise Metadata Report for RRS James Cook (740H) cruise JC136

Introduction

This report collates information from the BODC cruise inventory and oceanographic databases. It presents

Cruise Inventory Information

Long name RRS James Cook (740H) cruise JC136
Short name JC136
Objectives and Narrative Cruise JC136 is associated with a NERC joint standard research grant (NE/K011855/1 and NE/K013513/1) entitled "Influence of population connectivity on depth-dependent diversity of deep-sea marine benthic biota". The aims of this project are to investigate connectivity among deep-sea populations at different depths and spatial scales using: 1) larval dispersal modelling using Lagrangian particle tracking, driven by hydrographic models, 2) population genetics/genomics and 3) benthic community analysis. The aims of cruise JC136 were then to sample a range of sites and depth bands to:
1. obtain physical samples of 4 model organisms for molecular analysis.
2. gather benthic biological survey data for community level analysis.
3. collect oceanographic data to validate high resolution oceanographic models with which we will model larval dispersal.

We visited 5 sites in the NE Atlantic (Rockall Bank, George Bligh Bank, Anton Dohrn Seamount, Wyville-Thomson Ridge, and Rosemary Bank) undertaking 27 ROV dives, 12 AUV missions, 43 CTD casts, 2 mooring deployments and equipment trials. All cruise aims were broadly met. We obtained 3630 biological samples, including sufficient depth and site coverage for molecular analysis of 3 target species. We obtained video transect data with sufficient replication and depth stratification from 3 sites and near complete sampling from a 4th. We obtained sufficient oceanographic data to validate our models. In addition, we gathered 5811.66 km2 of seafloor multibeam to contribute to ongoing efforts to map the North Atlantic, including the first multibeam from the Geike Slide and Hebridean Slope Nature Conservation Marine Protected Area (NCMPA). Poor visitbility at the seabed prevented a planned resurvey of the Darwin Mounds Marine Protected Area (MPA) (see JC60).
Ship RRS James Cook
Departure Port Southampton, United Kingdom
Departure Date 2016-05-14
Arrival Port Southampton, United Kingdom
Arrival Date 2016-06-23
Principal Scientist(s) Kerry Howell (University of Plymouth School of Marine Science and Engineering), Michelle L Taylor (University of Oxford Department of Zoology)
Responsible Organisation University of Plymouth School of Marine Science and Engineering
Associated Project(s)
IHB Sea Areas Visited North East Atlantic Ocean (limit 40W)
Marsden Squares Visited 145;3/145;4/181/182
Work Area Description Northeast Atlantic (Rockall Bank, George Bligh Bank, Anton Dohrn Seamount, Wyville-Thomson Ridge and Rosemary Bank).
Unable to lookup cruise bounds at this time
Work Area Bounding Polygon
Southern Limit unknown
Northern Limit unknown
Western Limit unknown
Eastern Limit unknown

Cruise Inventory Datasets

Physical oceanography  
CTD stations Quantity: number of profiles = 43
Description: A CTD Sea-Bird 9plus underwater unit was used that recorded a set of standard parameters of sea water (salinity, temperature, depth) in a binary format. A TRDI WHM 300kHz Lowered Acoustic Doppler Current Profiler (LADCP) was installed in a downward-looking orientation on the CTD frame for measurements of the velocity components.  
Biology and fisheries  
Other biological/fisheries measurement Quantity: number of samples = 3630
Description: A total of 3630 biological samples of four target species were collected for molecular analysis. Sufficient depth and site coverage were achieved for 3 of these species.  
Other biological/fisheries measurement Quantity: number of dives = 27
Description: Twenty seven ROV dives were undertaken during the course of the cruise for video transects and biological sample collection.  
Other biological/fisheries measurement Quantity: number of track lines = 42
Description: A total of 42, 750 km long video transects were achieved across five sites using the Isis ROV during the cruise, for the purposes of assessing faunal diversity and community composition.  
Geology and geophysics  
Bottom photography Quantity: number of dives = 27
Description: Twenty seven ROV dives were undertaken during the course of the cruise for video transects and biological sample collection.  
Bottom photography Quantity: number of track lines = 42
Description: A total of 42, 750 km long video transects were achieved across five sites using the Isis ROV during the cruise, for the purposes of assessing faunal diversity and community composition.  
Bottom photography Quantity: number of dives = 12
Description: Twelve AUV missions were completed during the cruise to collect multibeam, side scan sonar, and image data.  
Long/short range side scan sonar Quantity: track kilometres = 89
Description: Side scan and chirp data collected using the EM2040 on Autosub6000, to be processed at BGS, Edinburgh.  
Long/short range side scan sonar Quantity: number of dives = 12
Description: Twelve AUV missions were completed during the cruise to collect multibeam, side scan sonar, and image data.  
Multi-beam echosounding Quantity: number of dives = 12
Description: Twelve AUV missions were completed during the cruise to collect multibeam, side scan sonar, and image data.  
Multi-beam echosounding Quantity: track kilometres = 532
Description: Collected using the ship's system EM120, to be processed at BGS, Edinburgh  
Multi-beam echosounding Quantity: survey square kilometres = 5811
Description: Multibeam data collected using the ship's systems EM120 (depths greater than 800 m) and EM710 (depths less than 800 m), and the EM2040 on Autosub6000 processed onboard the ship.  
Multi-beam echosounding Quantity: track kilometres = 83
Description: Collected using the EM2040 on Autosub6000, to be processed at BGS, Edinburgh  

Cruise Inventory Mooring/Buoy Operations

Latitude Longitude Data type Description
57° 37' N 10° 49' E Current profiler (eg ADCP) Mooring deployed at 1220 m depth. Equipped with upward-looking TRDI 75kHz ADCPs for measurements of current velocities in the whole water column and 300KHz downward-looking ADCP for measurements in the bottom layer.
57° 36' N 10° 49' E Current profiler (eg ADCP) Mooring deployed at 808 m depth. Equipped with upward-looking TRDI 75kHz ADCPs for measurements of current velocities in the whole water column and 300KHz downward-looking ADCP for measurements in the bottom layer.

Summary of BODC Data Holdings for the Cruise

National Oceanographic Database

Summary

# Series Instrument Description Parameters
1 Meteorological data logger Air pressure
Air temperature
Atmospheric humidity
Date and time
Horizontal spatial co-ordinates
Raw light meter output
Reference numbers
Solar Radiation
Visible waveband radiance and irradiance measurements in the atmosphere
Wind strength and direction
1 Multi-beam echosounder Bathymetry and Elevation
Date and time
Horizontal platform movement
Horizontal spatial co-ordinates
Platform or instrument orientation
Reference numbers
1 Multiple instrument types Chlorophyll pigment concentrations in water bodies
Date and time
Electrical conductivity of the water column
Horizontal spatial co-ordinates
Metadata parameters
Raw fluorometer output
Raw suspended particulate material concentration sensor output
Reference numbers
Salinity of the water column
Temperature of the water column
Transmittance and attenuance of the water column

Note: Parameter terms are taken from the BODC Parameter Discovery Vocabulary XML (SKOS)

Full List

BODC Reference Instrument Description Date/Time Location  
2012094 Meteorological data logger 2016-05-14 08:00Z to 2016-06-22 09:47Z 49° 51' N to 59° 51' N; 14° 0' W to 0° 59' W Click for more
2012101 Multiple instrument types 2016-05-14 08:00Z to 2016-06-22 09:47Z 49° 51' N to 59° 51' N; 14° 0' W to 0° 59' W Click for more
2012113 Multi-beam echosounder 2016-05-14 08:00Z to 2016-06-22 09:47Z 49° 51' N to 59° 51' N; 14° 0' W to 0° 59' W Click for more

Project Database

No data currently held for this cruise in the BODC Project Database

References

Track Charts

Track Chart

Reports

Cruise Report