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Metadata Report for BODC Series Reference Number 1346232


Metadata Summary

Data Description

Data Category Water sample data
Instrument Type
NameCategories
Lever Action Niskin Bottle  discrete water samplers
Instrument Mounting lowered unmanned submersible
Originating Country United Kingdom
Originator Mr Mark Stinchcombe
Originating Organization National Oceanography Centre, Southampton
Processing Status banked
Online delivery of data Download available - Ocean Data View (ODV) format
Project(s) UKSOLAS
 

Data Identifiers

Originator's Identifier D326_CTD_NUTS_257:16407B
BODC Series Reference 1346232
 

Time Co-ordinates(UT)

Start Time (yyyy-mm-dd hh:mm) 2008-01-18 08:25
End Time (yyyy-mm-dd hh:mm) -
Nominal Cycle Interval -
 

Spatial Co-ordinates

Latitude 12.69455 N ( 12° 41.7' N )
Longitude 27.10032 W ( 27° 6.0' W )
Positional Uncertainty Unspecified
Minimum Sensor or Sampling Depth 20.9 m
Maximum Sensor or Sampling Depth 300.1 m
Minimum Sensor or Sampling Height 4946.2 m
Maximum Sensor or Sampling Height 5225.4 m
Sea Floor Depth 5246.3 m
Sea Floor Depth Source -
Sensor or Sampling Distribution Unspecified -
Sensor or Sampling Depth Datum Unspecified -
Sea Floor Depth Datum Instantaneous - Depth measured below water line or instantaneous water body surface
 

Parameters

BODC CODERankUnitsTitle
ADEPZZ011MetresDepth (spatial coordinate) relative to water surface in the water body
BOTTFLAG1Not applicableSampling process quality flag (BODC C22)
FIRSEQID1DimensionlessBottle firing sequence number
NTRZAATX1Micromoles per litreConcentration of nitrate+nitrite {NO3+NO2} per unit volume of the water body [dissolved plus reactive particulate phase] by colorimetric autoanalysis
PHOSAATX1Micromoles per litreConcentration of phosphate {PO43- CAS 14265-44-2} per unit volume of the water body [dissolved plus reactive particulate phase] by colorimetric autoanalysis
ROSPOSID1DimensionlessBottle rosette position identifier
SAMPRFNM1DimensionlessSample reference number
SLCAAATX1Micromoles per litreConcentration of silicate {SiO44- CAS 17181-37-2} per unit volume of the water body [dissolved plus reactive particulate phase] by colorimetric autoanalysis

Definition of BOTTFLAG

BOTTFLAGDefinition
0The sampling event occurred without any incident being reported to BODC.
1The filter in an in-situ sampling pump physically ruptured during sample resulting in an unquantifiable loss of sampled material.
2Analytical evidence (e.g. surface water salinity measured on a sample collected at depth) indicates that the water sample has been contaminated by water from depths other than the depths of sampling.
3The feedback indicator on the deck unit reported that the bottle closure command had failed. General Oceanics deck units used on NERC vessels in the 80s and 90s were renowned for reporting misfires when the bottle had been closed. This flag is also suitable for when a trigger command is mistakenly sent to a bottle that has previously been fired.
4During the sampling deployment the bottle was fired in an order other than incrementing rosette position. Indicative of the potential for errors in the assignment of bottle firing depth, especially with General Oceanics rosettes.
5Water was reported to be escaping from the bottle as the rosette was being recovered.
6The bottle seals were observed to be incorrectly seated and the bottle was only part full of water on recovery.
7Either the bottle was found to contain no sample on recovery or there was no bottle fitted to the rosette position fired (but SBE35 record may exist).
8There is reason to doubt the accuracy of the sampling depth associated with the sample.
9The bottle air vent had not been closed prior to deployment giving rise to a risk of sample contamination through leakage.

Definition of Rank

  • Rank 1 is a one-dimensional parameter
  • Rank 2 is a two-dimensional parameter
  • Rank 0 is a one-dimensional parameter describing the second dimension of a two-dimensional parameter (e.g. bin depths for moored ADCP data)

Problem Reports

No Problem Report Found in the Database


Data Access Policy

Open Data supplied by Natural Environment Research Council (NERC)

You must always use the following attribution statement to acknowledge the source of the information: "Contains data supplied by Natural Environment Research Council."


Narrative Documents

Niskin Bottle

The Niskin bottle is a device used by oceanographers to collect subsurface seawater samples. It is a plastic bottle with caps and rubber seals at each end and is deployed with the caps held open, allowing free-flushing of the bottle as it moves through the water column.

Standard Niskin

The standard version of the bottle includes a plastic-coated metal spring or elastic cord running through the interior of the bottle that joins the two caps, and the caps are held open against the spring by plastic lanyards. When the bottle reaches the desired depth the lanyards are released by a pressure-actuated switch, command signal or messenger weight and the caps are forced shut and sealed, trapping the seawater sample.

Lever Action Niskin

The Lever Action Niskin Bottle differs from the standard version, in that the caps are held open during deployment by externally mounted stainless steel springs rather than an internal spring or cord. Lever Action Niskins are recommended for applications where a completely clear sample chamber is critical or for use in deep cold water.

Clean Sampling

A modified version of the standard Niskin bottle has been developed for clean sampling. This is teflon-coated and uses a latex cord to close the caps rather than a metal spring. The clean version of the Levered Action Niskin bottle is also teflon-coated and uses epoxy covered springs in place of the stainless steel springs. These bottles are specifically designed to minimise metal contamination when sampling trace metals.

Deployment

Bottles may be deployed singly clamped to a wire or in groups of up to 48 on a rosette. Standard bottles and Lever Action bottles have a capacity between 1.7 and 30 L. Reversing thermometers may be attached to a spring-loaded disk that rotates through 180° on bottle closure.

Inorganic nutrients concentrations (micromolar sensitivity nitrate plus nitrite, phosphate and silicate) for UK SOLAS cruise Discovery D326

Originator's Protocol for Data Acquisition and Analysis

Samples for inorganic nutrient analyses were drawn from Niskin bottles deployed on the CTD rosette frame, and from the ship's non-toxic pumped water supply. Samples were taken in 25 ml sterilin coulter counter vials, and refrigerated at 4 degree C prior to analysis, which took place within 24 hours. Analysis for nitrate plus nitrite, phosphate and silicate was undertaken on a Skalar San Plus autoanalyser following methods described by Kirkwood (1994), with the exception that the pump rates through the phosphate line were increased by a factor of 1.5 to improve reproducibility and peak shape. Lines were washed daily with 0.5 M sodium hydroxide and 10% Decon (N, Si). Wash time and sample time were 90 seconds. Lines were flooded with Decon for transit. A single set of mixed standards were made up by diluting 5 mM solutions made from weighed dried salts in 1 L of ASW into plastic 1 L volumetric.
Data processing was undertaken using Skalar proprietary software. Time series of baseline, instrument sensitivity, calibration curve correlation coefficient, nitrate reduction efficiency and duplicate difference were compiled and updated on a daily basis.
More information about the performance of the autoanalyser can be obtained from the cruise report.

References Cited

Kirkwood D.S., 1994. Nutrients: Practical notes on their determination in seawater. ICES Techniques in Marine Environmental Sciences report 17. International Council for the Exploration of the Seas, Copenhagen, 25 pp.

BODC Data Processing Procedures

Data were received by BODC in Microsoft Excel spreadsheet format as part of the underway and CTD samples data compendium files compiled by Micha Rijkenberg and containing the nutrient data plus other parameters measured by various project participants.

CTD data were identified using CTD cast number, bottle number and bottle firing depth. Underway data were identified using samples identifiers and sampling date and time. No discrepancies were found between the source files and existing records in BODC database.

In four instances samples were present in duplicate. If both values were flagged as above the limit of detection by the originator the values were averaged and the standard deviation calculated prior to loading in the database. If one value was below the LOD and the other value above then only the value above LOD was loaded to the database. No standard deviation was derived if both values were below LOD.

Parameter codes defined in BODC parameter dictionary were assigned to the variables as follows:

Originator's Parameter Units Description BODC Parameter Code Units Comments
Nitrate µM Concentration of nitrate plus nitrite per unit volume of the water column NTRZAATX µmol L-1 none
- - Concentration standard deviation of nitrate plus nitrite per unit volume of the water column SDNZAATX µmol L-1 BODC derived
Phosphate µM Concentration of phosphate per unit volume of the water column PHOSAATX µmol L-1 none
- - Concentration standard deviation of phosphate per unit volume of the water column SDPHAATX µmol L-1 BODC derived
Silicate µM Concentration of dissolved silicate SLCAAATX µmol L-1 none
- - Concentration standard deviation of silicate per unit volume of the water column SLSDAATX µmol L-1 BODC derived

The data were then banked according to BODC standard procedures for sample data.

Data Quality Report

One silicate value (NT83, 16/01/2008 11:00) was clearly out of range and has been flagged suspect in the database.

The following information was provided by the originator:

The limits of detection were defined as twice the level of background noise averaged out over the course of the cruise. These were 0.28 µM for the nitrate+nitrite line, 0.06 µM for the silicate line and 0.04 µM for the phosphate line.

The error on the data were as follows: 1.20% for nitrate+nitrite concentrations, 1.48% for silicate concentrations and 1.79% for phosphate concentration.


Project Information

UK Surface Ocean Lower Atmosphere Study

The UK Surface Ocean Lower Atmosphere Study (UK SOLAS) is the UK's contribution to the international SOLAS programme.

UK SOLAS formed interdisciplinary teams to address three primary aims

  • To determine the mechanisms controlling rates of chemical transfer and improve estimates of chemical exchanges
  • To evaluate the impact of these exchanges on the biogeochemistry of the surface ocean and lower atmosphere and on feedbacks between the ocean and atmosphere
  • To quantify the impacts of these boundary layer processes on the global climate system

UK SOLAS started in 2003, to run for seven years. The programme was funded by the Natural Environment Research Council.

Funded projects

In total, 19 projects have been funded by UK SOLAS, over four funding rounds.

Project Title Short Title Principal Investigator
Impact of atmospheric dust derived material and nutrient inputs on near-surface plankton microbiota in the tropical North Atlantic Dust Eric Achterberg
The role and effects of photoprotective compounds in marine plankton - Steve Archer
Field observations of sea spray, gas fluxes and whitecaps SEASAW Ian Brooks
Factors influencing the biogeochemistry of iodine in the marine environment - Lucy Carpenter
Global model of aerosol processes - effects of aerosol in the marine atmospheric boundary layer GLOMAP Ken Carslaw
Ecological controls on fluxes of dimethyl sulphide (DMS) to the atmosphere - David Green
Dust outflow and deposition to the ocean DODO Ellie Highwood
Investigation of near surface production of iodocarbons - rates and exchanges INSPIRE Gill Malin
Reactive halogens in the marine boundary layer RHaMBLe Gordon McFiggans
The role of bacterioneuston in determining trace gas exchange rates - Colin Murrell
Measuring methanol in sea water and investigating its sources and sinks in the marine environment - Phil Nightingale
The impact of coastal upwellings on air-sea exchange of climatically important gases ICON Carol Robinson
The Deep Ocean Gas Exchange Experiment DOGEE Rob Upstill-Goddard
High wind air-sea exchanges HiWASE Margaret Yelland
Aerosol characterisation and modelling in the marine environment ACMME James Allan
3D simulation of dimethyl sulphide (DMS) in the north east Atlantic - Icarus Allen
Processes affecting the chemistry and bioavailability of dust borne iron - Michael Krom
The chemical structure of the lowermost atmosphere - Alastair Lewis
Factors influencing the oxidative chemistry of the marine boundary layer - Paul Monks

UK SOLAS has also supported ten tied studentships, and two CASE studentships.

Fieldwork

UK SOLAS fieldwork has included eight dedicated research cruises in the North Atlantic Ocean. Continuous measurements were made aboard aboard the Norwegian weather ship, Polarfront, until her decommission in 2009. Time series have been established at the SOLAS Cape Verde Observatory, and at the Plymouth Marine Laboratory L4 station. Experiments have taken place at the Bergen mesocosm facility.

A series of collaborative aircraft campaigns have added complementary atmospheric data. These campaigns were funded by UK SOLAS, African Monsoon Multidisciplinary Analyses (AMMA-UK), Dust and Biomass Experiment (DABEX) and the Facility for Airborne Atmospheric Measurements (FAAM).

Weblink: http://www.nerc.ac.uk/research/programmes/solas/


Data Activity or Cruise Information

Data Activity

Start Date (yyyy-mm-dd) 2008-01-18
End Date (yyyy-mm-dd) 2008-01-18
Organization Undertaking ActivityUniversity of Southampton School of Ocean and Earth Science
Country of OrganizationUnited Kingdom
Originator's Data Activity IdentifierD326_CTD_16407B
Platform Categorylowered unmanned submersible

BODC Sample Metadata Report for D326_CTD_16407B

Sample reference number Nominal collection volume(l) Bottle rosette position Bottle firing sequence number Minimum pressure sampled (dbar) Maximum pressure sampled (dbar) Depth of sampling point (m) Bottle type Sample quality flag Bottle reference Comments
193163   10.00 1 1  301.50  302.60  300.10 Lever Action Niskin Bottle No problem reported    
193164   10.00 2 2  201.60  203.20  201.10 Lever Action Niskin Bottle No problem reported    
193165   10.00 3 3  151.60  152.40  151.10 Lever Action Niskin Bottle No problem reported    
193166   10.00 4 4  101.50  102.10  101.20 Lever Action Niskin Bottle No problem reported    
193167   10.00 5 5   75.70   76.50   75.60 Lever Action Niskin Bottle No problem reported    
193168   10.00 13 6   76.10   76.70   75.90 Lever Action Niskin Bottle No problem reported    
193169   10.00 14 7   75.70   77.00   75.90 Lever Action Niskin Bottle No problem reported    
193170   10.00 6 8   55.70   56.80   55.90 Lever Action Niskin Bottle No problem reported    
193171   10.00 15 9   55.90   56.60   55.90 Lever Action Niskin Bottle No problem reported    
193172   10.00 16 10   55.80   56.90   56.00 Lever Action Niskin Bottle No problem reported    
193173   10.00 7 11   31.00   31.50   31.10 Lever Action Niskin Bottle No problem reported    
193174   10.00 9 12   31.10   31.50   31.10 Lever Action Niskin Bottle No problem reported    
193175   10.00 10 13   30.80   31.40   30.90 Lever Action Niskin Bottle No problem reported    
193176   10.00 11 14   30.80   31.20   30.80 Lever Action Niskin Bottle No problem reported    
193177   10.00 12 15   30.60   31.40   30.80 Lever Action Niskin Bottle No problem reported    
193178   10.00 17 16   30.60   31.50   30.90 Lever Action Niskin Bottle No problem reported    
193179   10.00 8 17   20.60   21.40   20.90 Lever Action Niskin Bottle No problem reported    
193180   10.00 18 18   20.80   21.50   21.00 Lever Action Niskin Bottle No problem reported    
193181   10.00 19 19   20.70   21.20   20.80 Lever Action Niskin Bottle No problem reported    
193182   10.00 20 20   20.80   21.10   20.80 Lever Action Niskin Bottle No problem reported    
193183   10.00 21 21   20.70   21.20   20.80 Lever Action Niskin Bottle No problem reported    
193184   10.00 22 22    5.60    6.70    6.10 Lever Action Niskin Bottle No problem reported    
193185   10.00 23 23    4.70    6.70    5.70 Lever Action Niskin Bottle No problem reported    
193186   10.00 24 24    5.70    6.20    5.90 Lever Action Niskin Bottle No problem reported    

Please note:the supplied parameters may not have been sampled from all the bottle firings described in the table above. Cross-match the Sample Reference Number above against the SAMPRFNM value in the data file to identify the relevant metadata.

Related Data Activity activities are detailed in Appendix 1

Cruise

Cruise Name D326
Departure Date 2008-01-05
Arrival Date 2008-02-05
Principal Scientist(s)Eric Pieter Achterberg (University of Southampton School of Ocean and Earth Science)
Ship RRS Discovery

Complete Cruise Metadata Report is available here


Fixed Station Information


No Fixed Station Information held for the Series


BODC Quality Control Flags

The following single character qualifying flags may be associated with one or more individual parameters with a data cycle:

Flag Description
Blank Unqualified
< Below detection limit
> In excess of quoted value
A Taxonomic flag for affinis (aff.)
B Beginning of CTD Down/Up Cast
C Taxonomic flag for confer (cf.)
D Thermometric depth
E End of CTD Down/Up Cast
G Non-taxonomic biological characteristic uncertainty
H Extrapolated value
I Taxonomic flag for single species (sp.)
K Improbable value - unknown quality control source
L Improbable value - originator's quality control
M Improbable value - BODC quality control
N Null value
O Improbable value - user quality control
P Trace/calm
Q Indeterminate
R Replacement value
S Estimated value
T Interpolated value
U Uncalibrated
W Control value
X Excessive difference

SeaDataNet Quality Control Flags

The following single character qualifying flags may be associated with one or more individual parameters with a data cycle:

Flag Description
0 no quality control
1 good value
2 probably good value
3 probably bad value
4 bad value
5 changed value
6 value below detection
7 value in excess
8 interpolated value
9 missing value
A value phenomenon uncertain
B nominal value
Q value below limit of quantification

Appendix 1: D326_CTD_16407B

Related series for this Data Activity are presented in the table below. Further information can be found by following the appropriate links.

If you are interested in these series, please be aware we offer a multiple file download service. Should your credentials be insufficient for automatic download, the service also offers a referral to our Enquiries Officer who may be able to negotiate access.

Series IdentifierData CategoryStart date/timeStart positionCruise
1985250Water sample data2008-01-18 08:25:0012.69455 N, 27.10032 WRRS Discovery D326
1987059Water sample data2008-01-18 08:25:0012.69455 N, 27.10032 WRRS Discovery D326