Cruise inventory

RRS Discovery D338

Cruise summary report

Cruise Info. 
Ship name (ship code)RRS Discovery (74E3)
Cruise identifierD338
Cruise period2009-04-15 — 2009-05-27
StatusCompleted
Port of departureSanta Cruz de Tenerife, Spain
Port of returnSanta Cruz de Tenerife, Spain
PurposeResearch
ObjectivesThis cruise is part of the UK science contribution to the international SOLAS project (Surface Ocean Lower Atmosphere Study www.uea.ac.uk/env/solas/) which aims to advance our understanding of environmentally important interactions between the ocean and the atmosphere. Data collected during the cruise will help to determine the influence of coastal/shelf regions (20-200 km offshore) on microbiological activity in the ocean and chemical interactions between the ocean and the atmosphere. Deep water containing high concentrations of nutrients such as nitrate, and gases such as nitrous oxide and methane, rises to the surface (upwells) at the Mauritanian shelf edge and moves offshore. These nutrients can be chemically altered by sunlight and used by bacteria and microscopic plants to grow. The gases escape to the atmosphere and contribute to global warming. This cruise will sample the upwelled water as it moves offshore measuring its temperature, salinity, nutrient and gas content and the impact this water has on microbiological growth and atmospheric composition in order to improve international global climate models.

The cruise has three scientific objectives:

1. To determine the role of upwelling on the supply, loss and air-sea exchange of climatically important gases produced by plankton
2. To determine the role of light in breaking down upwelled and recently produced dissolved organic matter and in producing climatically important trace gases
3. To determine the impact of nutrient enriched upwelled water on the spatial and temporal variability of plankton community structure and activity and resultant influence on biogenic gas flux
Chief scientistCarol Robinson (University of East Anglia School of Environmental Sciences)
ProjectSurface Ocean Lower Atmosphere Study (UK SOLAS)
Coordinating bodySchool of Environmental Sciences, University of East Anglia
Cruise reportRRS Discovery D338 cruise report d338.pdf — access key 'C' (7.73 MB) 
Ocean/sea areas 
GeneralNorth East Atlantic Ocean (limit 40W)
SpecificEastern Atlantic
Track chartsRRS Discovery D338 cruise track — d338trk.pdf (0.02 MB) 
Measurements 
Physical oceanography 
Transparency (eg transmissometer)Quantity: number of deployments = 27
Description: In-water optics rig: i) Fast Repetition Rate Fluorometer (phytoplankton physiology); ii) Satlantic UV sensor (downwelling spectral UV light at 305, 320, 340 and 380 nm); iii) Wetlabs ac-9 (attenuation and absorption at 9 wavelengths: 412, 440, 488, 510, 532, 555, 650, 676, 715 nm – decomposed into a(c) total and CDOM by using casts with and without supracap filters); iv) SeaBird SBE19+ CTD (temperature and salinity with depth for correction of the ac9); v) ancillary PAR measurements (determination of light levels in water column)
Optics (eg underwater light levels)Quantity: number of deployments = 27
Description: In-water optics rig: i) Fast Repetition Rate Fluorometer (phytoplankton physiology); ii) Satlantic UV sensor (downwelling spectral UV light at 305, 320, 340 and 380 nm); iii) Wetlabs ac-9 (attenuation and absorption at 9 wavelengths: 412, 440, 488, 510, 532, 555, 650, 676, 715 nm – decomposed into a(c) total and CDOM by using casts with and without supracap filters); iv) SeaBird SBE19+ CTD (temperature and salinity with depth for correction of the ac9); v) ancillary PAR measurements (determination of light levels in water column)
Chemical oceanography 
OxygenQuantity: number of stations = 51
Description: Vertical profiles for dissolved oxygen concentration
OxygenQuantity: number of samples = 30
Description: Calibration samples for optode in non toxic seawater supply
OxygenQuantity: number of experiments = 19
Description: Photo-oxidation experiments – carbon monoxide, dissolved oxygen and pH
OxygenQuantity: number of measurements = 50
Description: Continuous measurements of pCO2 and O2using non toxic supply
Carbon dioxideQuantity: number of measurements = 50
Description: Continuous measurements of pCO2 and O2using non toxic supply
Other dissolved gasesQuantity: activity duration in days = 15
Description: Underway SF6 (non toxic)
Other dissolved gasesQuantity: number of stations = 40
Description: OVOC analysis
Other dissolved gasesQuantity: number of stations = 28
Description: Vertical profiles - carbon monoxide
Other dissolved gasesQuantity: number of experiments = 19
Description: Photo-oxidation experiments – carbon monoxide, dissolved oxygen and pH
Other dissolved gasesQuantity: number of stations = 38
Description: Molecular analysis of methanogens
Other dissolved gasesQuantity: number of stations = 25
Description: 3He/4He measurements on vertical profiles
Other dissolved gasesQuantity: number of profiles = 36
Description: Vertical Profiles for DMS and DMSP
Other dissolved gasesQuantity: number of stations = 35
Description: Vertical Profiles for N2O and CH4
Other dissolved gasesQuantity: number of stations = 50
Description: SF6 measurements – vertical profiles
PhosphateQuantity: number of stations = 40
Description: Alkaline phosphatase analysis
PhosphateQuantity: number of stations = 68
Description: Vertical profiles for micronutrient analysis, analysed by colorimetric segmented flow auto-analysis
NitrateQuantity: number of stations = 68
Description: Vertical profiles for micronutrient analysis, analysed by colorimetric segmented flow auto-analysis
NitriteQuantity: number of stations = 68
Description: Vertical profiles for micronutrient analysis, analysed by colorimetric segmented flow auto-analysis
AmmoniaQuantity: number of experiments = 19
Description: Photo-oxidation experiments - ammonia
AmmoniaQuantity: number of stations = 28
Description: Vertical profiles - ammonia
AmmoniaQuantity: number of stations = 68
Description: Vertical profiles for micronutrient analysis, analysed by colorimetric segmented flow auto-analysis
SilicateQuantity: number of stations = 68
Description: Vertical profiles for micronutrient analysis, analysed by colorimetric segmented flow auto-analysis
AlkalinityQuantity: number of stations = 29
Description: Vertical profiles for dissolved DIC/ALK concentration to be analysed in UEA by Carol Robinson
pHQuantity: number of experiments = 19
Description: Photo-oxidation experiments – carbon monoxide, dissolved oxygen and pH
IsotopesQuantity: number of stations = 11
Description: Sample collection for determination of 15N-N2O
Other chemical oceanographic measurementsQuantity: number of stations = 25
Description: N-assimilation kinetics, NH4+ regeneration, NH4+ oxidation, NO2- oxidation.
Other chemical oceanographic measurementsQuantity: number of stations = 10
Description: Surfactants
Biology and fisheries 
Primary productivityQuantity: number of stations = 20
Description: Vertical profiles for gross primary production, community respiration and net community production (O2)
Primary productivityQuantity: number of stations = 28
Description: Vertical profiles for on-board carbon fixation primary production
Phytoplankton pigs (eg chlorophyll, fluorescence)Quantity: number of deployments = 27
Description: In-water optics rig: i) Fast Repetition Rate Fluorometer (phytoplankton physiology); ii) Satlantic UV sensor (downwelling spectral UV light at 305, 320, 340 and 380 nm); iii) Wetlabs ac-9 (attenuation and absorption at 9 wavelengths: 412, 440, 488, 510, 532, 555, 650, 676, 715 nm – decomposed into a(c) total and CDOM by using casts with and without supracap filters); iv) SeaBird SBE19+ CTD (temperature and salinity with depth for correction of the ac9); v) ancillary PAR measurements (determination of light levels in water column)
Phytoplankton pigs (eg chlorophyll, fluorescence)Quantity: number of samples = 50
Description: Calibration samples for underway chlorophyll from non toxic seawater supply
Phytoplankton pigs (eg chlorophyll, fluorescence)Quantity: number of stations = 47
Description: Vertical profiles for phytoplankton pigment post-cruise analyses
Dissolved organic matter (inc DOC)Quantity: number of experiments = 19
Description: Photo-oxidation experiments – CDOM, fDOM
Dissolved organic matter (inc DOC)Quantity: number of stations = 28
Description: Vertical profiles - CDOM, fDOM
Dissolved organic matter (inc DOC)Quantity: number of experiments = 19
Description: Photo-oxidation experiments - DOC/N, amino acids
Dissolved organic matter (inc DOC)Quantity: number of stations = 28
Description: Vertical profiles – DOC/N, amino acids
Biochemical measurements (eg lipids, amino acids)Quantity: number of stations = 47
Description: Ambient concentrations and turnover rates of urea and three amino acids - leucine, methionine, tyrosine – by total bacterioplankton were measured using isotopic dilution time-series incubations. Using the same seawater sample, additions of UV irradiated deep seawater were made and the response of the bacterioplankton community measured in terms of the change in rate of amino acid uptake.
PhytoplanktonQuantity: number of stations = 16
Description: Vertical phytoplankton (10µm) net hauls (0-50m) for qualitative identification
PhytoplanktonQuantity: number of stations = 40
Description: Phytoplankton community growth and grazing rates
PhytoplanktonQuantity: number of stations = 45
Description: Vertical profiles of phytoplankton, bacteria abundance from Niskin bottles on CTD casts, by flow cytometry
PhytoplanktonQuantity: number of stations = 37
Description: Vertical profiles of phytoplankton abundance from Niskin bottles on CTD casts. Seawater samples preserved with Lugol’s iodine for post-cruise microscopic analysis of community structure/composition
ZooplanktonQuantity: number of stations = 10
Description: Vertical zooplankton (60µm and 700µm) net hauls (0-200m) for qualitative identification
ZooplanktonQuantity: number of stations = 37
Description: Vertical profiles of phytoplankton abundance from Niskin bottles on CTD casts. Seawater samples preserved with Lugol’s iodine for post-cruise microscopic analysis of community structure/composition
Pelagic bacteria/micro-organismsQuantity: number of stations = 12
Description: Incubations to determine CH4 oxidation rates
Pelagic bacteria/micro-organismsQuantity: number of stations = 21
Description: Heterotrophic bacterial production, Particulate uptake of 14C labelled methanol, acetaldehyde and acetone, Total oxidation of 14C labelled methanol, acetone and acetaldehyde.
Pelagic bacteria/micro-organismsQuantity: number of stations = 45
Description: Vertical profiles of phytoplankton, bacteria abundance from Niskin bottles on CTD casts, by flow cytometry
Other biological/fisheries measurementQuantity: number of stations = 15
Description: Incubations for continuous measurements of O2 consumption using micro electrodes and in vivo respiratory electron transport system activity
Other biological/fisheries measurementQuantity: number of stations = 20
Description: Vertical profiles for gross primary production, community respiration and net community production (O2)
Meteorology 
Incident radiationQuantity: activity duration in days = 38
Description: Deck mounted (over the CTD winch cab) Trios UV sensor: i) Hyperspectral (2.5 nm resolution: 200 – 500 nm wavelength) UV at 5 minute intervals through daylight hours; ii) decomposed hyperspectral into broadband UV-A and UV-B
Other meteorological measurementsQuantity: activity duration in days = 15
Description: OVOC analysis
Other meteorological measurementsQuantity: activity duration in days = 36
Description: Microtops sunphotometer measurements: i) Aerosol optical thickness at 340, 440, 675 and 870 nm; ii) water vapour content (cm)
Moorings, landers, buoys 
Physical oceanography 
CTD stations19° 24' 28" N  17° 49' 58" W — Buoy deployment. Wire Walker.
CTD stations19° 52' 40" N  18° 8' 36" W — Buoy deployment. Wire Walker.
CTD stations21° 36' 54" N  18° 3' 51" W — Buoy recovery. Wire Walker.
CTD stations21° 31' 9" N  17° 59' 21" W — Buoy deployment. Wire Walker.
CTD stations19° 26' 20" N  19° 9' 23" W — Buoy recovery. Wire Walker.
CTD stations19° 33' 56" N  18° 59' 21" W — Buoy deployment. Wire Walker.
CTD stations19° 33' 14" N  18° 55' 30" W — Buoy recovery. Wire Walker.
CTD stations19° 37' 37" N  18° 37' 1" W — Buoy recovery. Wire Walker.
CTD stations19° 37' 14" N  18° 27' 6" W — Buoy deployment. Wire Walker.
CTD stations19° 35' 11" N  18° 20' 14" W — Buoy recovery. Wire Walker.
CTD stations19° 44' 31" N  18° 37' 57" W — Buoy deployment. Wire Walker.
CTD stations19° 53' 3" N  18° 10' 47" W — Buoy recovery. Wire Walker.
Subsurface temperature measurements20° 26' 57" N  18° 25' 39" W — Buoy deployment. Thermistor.
Subsurface temperature measurements21° 14' 33" N  17° 17' 23" W — Buoy deployment. Thermistor.
Subsurface temperature measurements20° 39' 25" N  18° 42' 2" W — Buoy recovery. Thermistor.
Subsurface temperature measurements20° 37' 5" N  18° 25' 39" W — Buoy recovery. Thermistor.
Subsurface temperature measurements21° 13' 15" N  17° 22' 51" W — Buoy deployment. Thermistor.
Subsurface temperature measurements20° 2' 7" N  18° 37' 13" W — Buoy recovery. Thermistor.
Current profiler (eg ADCP)19° 24' 48" N  17° 55' 3" W — Buoy deployment. ADCP.
Current profiler (eg ADCP)19° 35' 46" N  19° 20' 43" W — Buoy recovery. ADCP.
Current profiler (eg ADCP)19° 26' 24" N  19° 5' 54" W — Buoy recovery. ADCP.
Current profiler (eg ADCP)21° 25' 15" N  17° 54' 43" W — Buoy deployment. ADCP.
Current profiler (eg ADCP)21° 40' 55" N  17° 56' 20" W — Buoy recovery. ADCP.
Current profiler (eg ADCP)19° 39' 42" N  18° 42' 53" W — Buoy recovery. ADCP.
Current profiler (eg ADCP)21° 39' 29" N  18° 39' 29" W — Buoy recovery. ADCP.
Current profiler (eg ADCP)21° 36' 3" N  18° 0' 21" W — Buoy deployment. ADCP.
Current profiler (eg ADCP)19° 43' 35" N  18° 42' 34" W — Buoy deployment. ADCP.
Current profiler (eg ADCP)19° 38' 31" N  18° 27' 12" W — Buoy deployment. ADCP.
Data held at BODC 
Discrete samples 
834  All plastic clean surface pumped supplyPhytoplankton taxonomic abundance in water bodies
Phosphate concentration parameters in the water column
Silicate concentration parameters in the water column
Ammonium concentration parameters in the water column
Nitrate concentration parameters in the water column
Phytoplankton generic abundance in water bodies
Bacteria generic abundance in water bodies
Bacteria taxonomic abundance in water bodies
Organosulphur species concentration parameters in the water column
Nitrite concentration parameters in the water column
102  CTD frame plus rosette samplerRaw suspended particulate material optical sensor output
Microzooplankton generic abundance in water bodies
Phytoplankton taxonomic abundance in water bodies
Phosphate concentration parameters in the water column
Density of the water column
Visible waveband radiance and irradiance measurements in the water column
Transmittance and attenuance of the water column
Silicate concentration parameters in the water column
Carbon monoxide and dioxide concentrations in the atmosphere
Ammonium concentration parameters in the water column
Dissolved oxygen parameters in the water column
Nitrate concentration parameters in the water column
Raw oxygen sensor output
Phytoplankton generic abundance in water bodies
Surfactant concentrations in water bodies
Dissolved concentration parameters for other gases in the water column
Temperature of the water column
Bacteria generic abundance in water bodies
Salinity of the water column
Bacteria taxonomic abundance in water bodies
Organosulphur species concentration parameters in the water column
Nitrite concentration parameters in the water column
Chlorophyll pigment concentrations in the water column
78  Sample taken from ship's non-toxic supplySalinity of the water column
Chlorophyll pigment concentrations in the water column
11  Surfactant concentrations in water bodies