Atlantic Meridional Transect (AMT)

Data inventories

Cruise — RRS James Cook JC053 (AMT20)

Information has been obtained from cruise reports and cruise personnel. If you notice any errors, please tell us and we will amend our records. If you have data sets which are not held at BODC, please send them to Arwen Bargery.

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12C and 13C stable isotope probe analysis of methylotrophs - incubationsStephanie Sargeant and Joanna DixonData not expected
15N nitrogen fixation rate experiments - incubations (CTD bottles)Andrew ReesReceived
Aerosol Optical Depth and Precipitable Water (Microtops Sun Photometer) - surface underwayTim Smyth and Chris GallienneReceived
Aerosol samples - major ions and trace metalsAlex BakerReceived
Alkenone concentrations (surface underway)Markus KienastData set overdue — was expected 2015-10-31
Ambient concentrations, microbial turnover rates and turnover times of methionine, leucine and organic phosphateMikhail V Zubkov et al.Received
Atmospheric (marine air) and surface ocean (underway) pCO2 measurements - calibrated and quality controlledVassilis KitidisData set overdue — was expected 2014-09-01
Bacterial abundance - AFC (CTD bottles)Mikhail V Zubkov and Ross J HollandReceived
Bacterial abundance - AFC (underway)Ross J Holland et al.Data set overdue — was expected 2016-10-03
Bacterial DNA analysis - surface, 33% of incident light and DCM sampled (CTD bottles)Jack GilbertData set overdue — was expected 2011-09-01
Bacterial respiration 24 hour incubations from surface and DCM water - Winkler (CTD bottles)Elena Garcia-Martin and Pablo SerretReceived
Bio-Optics - Above water UV measurementsTim Smyth and Chris GallienneReceived — online data delivery available
Bio-Optics - Above-water radiance measurements (MicroSAS)David Drapeau and William M BalchReceived — online data delivery available
Bio-Optics - Above-water radiance measurements (TRIOS RAMSES radiometer)Piotr KowalczukData not expected
Bio-Optics - AC9 profilesVictor Martinez-Vicente et al.Data set overdue — was expected 2016-11-01
Bio-Optics - Backscatter profiles (Hobilabs hydroscat 6 - bb6)Victor Martinez-Vicente et al.Data set overdue — was expected 2016-11-01
Bio-Optics - Flow-through measurements (AC9, SBE, TRIOS MicroFlu-CDOM fluorometer, LIIST 100X)Piotr KowalczukData set overdue — was expected 2014-02-01
Bio-Optics - Flow-through measurements - Temp, Sal, Fluor, bb (backscattering and acid labile backscattering), absorption and attenuation (9 wavelengths) (AC9, SBE, Wet Star, VSF)David Drapeau and William M BalchReceived — online data delivery available
Bio-Optics - FRRF flow-through measurements - raw files onlyTim Smyth et al.Received
Bio-Optics - FRRF profilesTim Smyth and Chris GallienneReceived — online data delivery available
Bio-Optics - UV sensor profilesVictor Martinez-Vicente et al.Data set overdue — was expected 2016-11-01
Bio-optics: Hyperspectral water leaving relectance measurements along cruise track (HyperSAS)Robert J W Brewin et al.Data set overdue — was expected 2016-11-01
Carbonate system perturbations - pH, chl-a, flow cytometry, P-I curves, phytoplankton emission spectra (CTD bottles)Gavin Tilstone and Barbora HoskovaReceived
CDOM absorption profiles - LWCC and PSICAM (CTD bottles)Monika Zablocka and Piotr KowalczukData set overdue — was expected 2015-10-02
CDOM profiles (CTD bottles)Gavin TilstoneReceived
Ceratium molecular analyses of 18s/28s rRNA (net haul)David Aldridge et al.Data not expected
CHN analysis in surface dwelling copepods - adult females (surface net tow)Rachel Harmer et al.Data set overdue — was expected 2015-11-30
CO2 fixation of dominant bacterial and eukaryotic groupsMikhail V Zubkov et al.Received
Coccolithophore and coccolithoviruse abundance - Flow cytometry (CTD bottles)Josef Nissimov et al.Data not expected
Coccolithophore composition - light microscopy (CTD bottles)David Drapeau and William M BalchReceived
Coccolithophore composition - light microscopy (surface underway)David Drapeau and William M BalchReceived
Community and bacterial respiration incubations (size-fractionated) - ETS in vivo (CTD bottles)Elena Garcia-Martin and Pablo SerretReceived
Continuous oxygen measurements with Aanderaa optode, calibrated with discrete Winkler samples (surface underway)Johanna Gloel et al.Data set overdue — was expected 2012-06-01
Continuous underway nav, bath, fluor, met and tsgJohn SeddonReceived
Copepod population genetic structure (WP2 - vertical haul)Erica GoetzeData set overdue — was expected 2014-02-01
CTD profiles (pres,temp,sal,fluor,trans,oxy,PAR,BBRTD) - processedRobert Thomas et al.Received — online data delivery available
CTD profiles (pres,temp,sal,fluor,trans,oxy,PAR,BBRTD) - raw data filesJeff Benson and Peter KeenReceived
CTD up-cast bottle firing dataJeff Benson and Peter KeenReceived
Dissolved hydrogen concentration continuous measurement from surface waters - air-segmented continuous-flow equilibrator (surface underway)Michael Fraser and Robert MooreReceived — online data delivery available
Dissolved hydrogen concentration profiles - air-segmented continuous-flow equilibrator (CTD bottles)Michael Fraser and Robert MooreData not expected
Dissolved hydrogen incubations spiked with 15N (bucket samples)Michael Fraser and Robert MooreData not expected
Dissolved oxygen concentrations (CTD bottles)Johanna Gloel and Jan KaiserReceived
DNA analysis of picophytoplankton community structure (CTD bottles)Carolina GrobData set overdue — was expected 2014-09-01
DNA extraction and analysis of coccolithophores and associated viruses (CTD bottles)Josef Nissimov et al.Received
DOC profiles (CTD bottles)Monika Zablocka and Piotr KowalczukReceived
Extracted chlorophyll-a (CTD bottles)Andrew Rees et al.Received
Extracted chlorophyll-a (underway)Andrew Rees et al.Received
Fluorescence Excitation Emission Matrix spectra - Varian Cary Eclipse spectrofluorometer (CTD bottles)Monika Zablocka and Piotr KowalczukData set overdue — was expected 2015-10-02
Genetic analysis of methylotrophic microbesStephanie Sargeant et al.Data set overdue — was expected 2016-08-02
Gross, net production and dark community respiration (on-deck incubations)John Stephens and Vassilis KitidisReceived
HPLC analysis of mycosporin-like amino acids (MAAs) in surface dwelling copepods - adult females, eggs and nauplii (surface net tow)Rachel Harmer and Ruth AirsData set overdue — was expected 2015-11-30
HPLC pigments (CTD bottles)Ruth AirsReceived
Influence of light on bacterivory of the smallest eukaryotesMikhail V Zubkov et al.Received
Mechanisms of carbon assimilation utilised by marine phytoplankton - DNA, RNA, pH, TA, DIC, POC (CTD bottles)Maeve Eason-Hubbard and Ros RickabyData set overdue — was expected 2015-01-01
Mechanisms of carbon assimilation utilised by marine phytoplankton - DNA, RNA, pH, TA, DIC, POC (surface underway)Maeve Eason-Hubbard and Ros RickabyData set overdue — was expected 2015-01-01
Mesozooplankton Community Size Structure - OPC (Net haul)Chris GallienneReceived
Mesozooplankton Community Size Structure - OPC (surface underway)Chris GallienneReceived
Microplankton incubations with seawaterDavid Aldridge et al.Data not expected
Microzooplankton community characterisation - FlowCAM (Net hauls)Manuela Hartmann et al.Data set overdue — was expected 2016-10-03
Molecular and taxonomic analyses of surface dwelling copepods - adult females, eggs and nauplii (surface net tow)Rachel Harmer et al.Data set overdue — was expected 2015-11-30
Mycosporine-like amino acid (MAA) analysis in phytoplankton from surface samples (CTD bottles)Rachel Harmer and Ruth AirsData set overdue — was expected 2014-05-01
Nauplii feeding experiments (surface net tow)Elaine Fileman et al.Data set overdue — was expected 2015-11-30
Net community production estimates from dissolved oxygen/argon ratio profiles measured by membrane inlet mass spectrometry (MIMS) on discrete samples (CTD bottles)Johanna Gloel et al.Data set overdue — was expected 2012-06-01
Net community production estimates from dissolved oxygen/argon ratios in surface waters measured continuously by membrane inlet mass spectrometry (MIMS) (surface underway)Johanna Gloel et al.Data set overdue — was expected 2012-06-01
Neuston community structure - 4% borax buffered formalin and 95% ethanol (surface net tows)Rachel Harmer et al.Received
nifH expression (CTD bottles)Andrew ReesData set overdue — was expected 2014-04-01
Nitrous oxide (N20) continuous underway measurements - Integrated Cavity Output Spectroscopy (surface underway)Imke Grefe and Jan KaiserReceived — online data delivery available
Nitrous oxide (N20) profiles - stable isotope analysis (CTD bottles)Imke Grefe and Jan KaiserData set overdue — was expected 2013-05-01
Nutrients micromolar (CTD bottles)Carolyn HarrisReceived
Optical backscatter profiles - Wetlabs BBRTD (CTD)Giorgio Dall'OlmoData not expected
Photoheterotrophy in dominant bacterial and eukaryotic groups - comparison of organic material uptake under light and dark conditionsPaola Gomez-Pereira and Mikhail V ZubkovReceived
Photosynthesis-irradiance (P-I) curves and phytoplankton emission spectra from surface and/or DCM samples (CTD bottles)Gavin Tilstone and Barbora HoskovaReceived
Phytoplankton absorption analysis - PABS (CTD bottles)Gavin Tilstone and Victor Martinez-VicenteData not expected
Phytoplankton community analysis - Lugols - FlowCAM analysis (CTD bottles)Elaine Fileman et al.Data set overdue — was expected 2015-11-30
Phytoplankton community structure and abundance - AFC (CTD bottles)Glen A TarranReceived
PIC, POC, PON and BSi measurements (CTD bottles)David Drapeau and William M BalchReceived
PIC, POC, PON and BSi measurements (surface underway)David Drapeau and William M BalchReceived
Plankton analyses (WP2 - vertical haul)Rachel Harmer et al.Data not expected
POC, PON, POP, chlorophyll-a, fatty acid and protein analysis in the DCM (CTD bottles) - fatty acid and proteins still pendingRafaella Nobili and Carol RobinsonReceived
Primary Production (size-frac 14C) profile data (CTD bottles)Gavin TilstoneReceived
Quantification and variation in cellular DMSP contents of prokaryotes (CTD bottles)Steve Archer et al.Data not expected
Rain water samples - Major ion and trace metal analysisAlex BakerData set overdue — was expected 2016-10-03
Respiration measurements (surface and DCM) - continuous oxygen decrease upto 24 hours measured with oxygen microelectrodes (CTD bottles)Elena Garcia-Martin and Pablo SerretData not expected
RNA gene expression in picophytoplanktonCarolina GrobData set overdue — was expected 2014-09-01
Salinity samples - bench salinometer (CTD bottles)Jeff BensonReceived
Salinity samples - bench salinometer (underway)Jeff BensonReceived
Seawater pH determination by spectrophotometry using m-cresol purple (CTD bottles)Vassilis Kitidis et al.Data set overdue — was expected 2014-09-01
Total Alkalinity samples (CTD bottles)Vassilis Kitidis et al.Data set overdue — was expected 2014-09-01
Total lipids analysis - specifically sphoingolipids associated with the cell death mechanism of the coccolithophores (CTD bottles)Charlotte WorthyData not expected
Triple oxygen isotope samples for determination of gross production from surface and below the mixed layer (CTD bottles)Johanna Gloel et al.Data set overdue — was expected 2012-06-01
Underway migration to series schema - meteorologyJohn Seddon et al.Received — online data delivery available
Underway migration to series schema - navigationJohn Seddon et al.Received — online data delivery available
Underway migration to series shema - surface hydrographyJohn Seddon et al.Received — online data delivery available
Vessel Mounted ADCP (VMADCP) - 150 kHz - raw data filesJohn SeddonReceived
Vessel Mounted ADCP (VMADCP) - 75 kHz - raw data filesJohn SeddonReceived
Zooplankton community structure - 4% formalin (WP2 vertical haul)Rafaella Nobili and Carol RobinsonData not expected
Zooplankton community structure from molecular analysis - ethanol (WP2 vertical haul)Claudia CastellaniData not expected
Zooplankton metabolic rate determination - respiration, egg production (incubations)Rafaella Nobili et al.Data set overdue — was expected 2016-09-01

 

 


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