Marine and freshwater microbial biodiversity (M&FMB)

Data set inventory

Cruise — RRS Charles Darwin CD132 (AMBITION)

Information has been obtained from cruise reports and personnel. If you notice any errors, please tell us and we will amend our records. If you have data sets which are not held at BODC, please send them to Gwen Moncoiffé.

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16S rRNA gene sequences from Prochlorochoccus and Synecochoccus isolated from water samplesMikhail V ZubkovReceived
Bacteria abundance and picoplankton composition by flow cytometryMikhail V ZubkovReceived
Bacterioplankton metabolic activity using 3H-Leucine, 3H-Glucose, 32P-phosphate and 35S-methionineMikhail V ZubkovData not expected
Bacterioplankton production rates by uptake of 14C-leucine and 14C-glucoseMikhail V ZubkovReceived
Bacteroidetes 16S rRNA partial nucleotide sequences from a surface water sampleJohn Fry and Kevin AshelfordReceived
Bottle salinity dataPeter H BurkillReceived
Catalogue of DNA samples extracted from water samplesMichael WymanReceived
cmuA gene sequence library from environmental water samples and enrichment experimentsJ Colin Murrell and Michael J CoxReceived
Continuous underway navigation, meteorological and surface hydrographyPeter H BurkillReceived
CTD profiles (incl. temp, sal, oxy, fluor, atten, turb) in the water columnPeter H BurkillReceived
Fast Repetition Rate Fluorometer (FRRF) profiles in the water column (unprocessed raw data)Peter H BurkillReceived
HPLC pigments profiles in the water columnPeter H Burkill and Denise CummingsReceived
Methyl halide utilising bacteria distribution data in the water columnJ Colin Murrell and Michael J CoxData not expected
Microbial DNA sample catalogueJ Colin Murrell and Michael J CoxReceived
Molecular data from Trichodesmium spp sample collections.David J ScanlanData not expected
Molecular data from Trichodesmium spp sample collections.Michael WymanData not expected
Moving Vessel Profiler (MVP) dataE Malcolm S WoodwardReceived
N2-fixing bacteria distribution dataMichael Wyman and Clare BirdData not expected
N2-fixing bacteria nifH gene nucleotide sequence data from water samplesMichael Wyman and Clare BirdData set overdue — was expected 2005-07-31
N2-fixing bacteria nifH peptide sequences from water samplesMichael Wyman and Clare BirdReceived
Nano- and microplankton taxonomy and abundance (Lugol) profilesClaire WiddicombeReceived
Nano- and picophytoplankton abundance profiles by flow cytometryGlen A TarranReceived
Nitrate and ammonium uptake rates using 15N tracers in the water columnAndrew ReesReceived
nosZ (denitrification) gene sequences (non-M&FMB MSc thesis)Michael WymanData not expected
Nutrients (+ nano-nutrients) concentration profiles in the water columnE Malcolm S WoodwardReceived
Particulate organic nitrogen (PON) concentrations in the water columnAndrew ReesReceived
Picophytoplankton molecular diversity and relative abundance dataDavid J Scanlan et al.Received
Picoplankton cyanobacterial PstS data (functional diversity)David J Scanlan and Nicholas J FullerReceived
Potential oxidation rates of methyl halides in the water columnJ Colin Murrell and Michael J CoxReceived
Primary production (14C uptake) and DOC production in the water columnMikhail V ZubkovReceived
rbeL (C-fixation) gene sequence data (non-M&FMB MSc thesis)Michael WymanData not expected
Relative abundance data of unicellular cyanobacterial diazotroph lineage (UCYN2-fix)David J Scanlan and Sophie MazardData not expected
Relative abundance of total Bacteria and Bacteroidetes by MPN-PCRJohn Fry and Kevin AshelfordReceived
Size-fractionated nitrate and ammonium uptake rates in the water column (15N-tracing experiments)Andrew ReesData not expected
Uncultured Bacteroidetes Polymerase Chain Reaction (PCR) score dataJohn FryReceived
Uncultured cyanobacterial diazotroph nifH and 16S rRNA gene sequences from water samplesDavid J Scanlan and Sophie MazardReceived
Uncultured phototrophic picoeukaryota and cyanobacteria 16S rRNA gene sequences from water samplesDavid J Scanlan and Nicholas J FullerReceived
Uptake kinetic of nitrate and ammonium nutrients using 15N tracersAndrew ReesData not expected