Marine and freshwater microbial biodiversity (M&FMB)
Data set inventory
Cruise — RRS Charles Darwin CD132 (AMBITION)
Information has been obtained from cruise reports and personnel. If you notice any errors, please tell us and we will amend our records. If you have data sets which are not held at BODC, please send them to Gwen Moncoiffé.
 Data set description  |
Source  |
Status |
|---|---|---|
| 16S rRNA gene sequences from Prochlorochoccus and Synecochoccus isolated from water samples | Mike Zubkov | Received |
| Bacteria abundance and picoplankton composition by flow cytometry | Mike Zubkov | Received |
| Bacterioplankton metabolic activity using 3H-Leucine, 3H-Glucose, 32P-phosphate and 35S-methionine | Mike Zubkov | Data not expected |
| Bacterioplankton production rates by uptake of 14C-leucine and 14C-glucose | Mike Zubkov | Received |
| Bacteroidetes 16S rRNA partial nucleotide sequences from a surface water sample | John Fry and Kevin Ashelford | Received |
| Bottle salinity data | Peter H Burkill | Received |
| Catalogue of DNA samples extracted from water samples | Michael Wyman | Received |
| cmuA gene sequence library from environmental water samples and enrichment experiments | J Colin Murrell and Michael J Cox | Received |
| Continuous underway navigation, meteorological and surface hydrography | Peter H Burkill | Received |
| CTD profiles (incl. temp, sal, oxy, fluor, atten, turb) in the water column | Peter H Burkill | Received |
| Fast Repetition Rate Fluorometer (FRRF) profiles in the water column (unprocessed raw data) | Peter H Burkill | Received |
| HPLC pigments profiles in the water column | Peter H Burkill and Denise Cummings | Received |
| Methyl halide utilising bacteria distribution data in the water column | J Colin Murrell and Michael J Cox | Data not expected |
| Microbial DNA sample catalogue | J Colin Murrell and Michael J Cox | Received |
| Molecular data from Trichodesmium spp sample collections. | Michael Wyman | Data not expected |
| Molecular data from Trichodesmium spp sample collections. | David J Scanlan | Data not expected |
| Moving Vessel Profiler (MVP) data | E Malcolm S Woodward | Received |
| N2-fixing bacteria distribution data | Michael Wyman and Clare Bird | Data not expected |
| N2-fixing bacteria nifH gene nucleotide sequence data from water samples | Michael Wyman and Clare Bird | Data set overdue — was expected 2005-07-31 |
| N2-fixing bacteria nifH peptide sequences from water samples | Michael Wyman and Clare Bird | Received |
| Nano- and microplankton taxonomy and abundance (Lugol) profiles | Claire Widdicombe | Received |
| Nano- and picophytoplankton abundance profiles by flow cytometry | Glen Tarran | Received |
| Nitrate and ammonium uptake rates using 15N tracers in the water column | Andy Rees | Received |
| nosZ (denitrification) gene sequences (non-M&FMB MSc thesis) | Michael Wyman | Data not expected |
| Nutrients (+ nano-nutrients) concentration profiles in the water column | E Malcolm S Woodward | Received |
| Particulate organic nitrogen (PON) concentrations in the water column | Andy Rees | Received |
| Picophytoplankton molecular diversity and relative abundance data | David J Scanlan et al. | Received |
| Picoplankton cyanobacterial PstS data (functional diversity) | David J Scanlan and Nicholas J Fuller | Received |
| Potential oxidation rates of methyl halides in the water column | J Colin Murrell and Michael J Cox | Received |
| Primary production (14C uptake) and DOC production in the water column | Mike Zubkov | Received |
| rbeL (C-fixation) gene sequence data (non-M&FMB MSc thesis) | Michael Wyman | Data not expected |
| Relative abundance data of unicellular cyanobacterial diazotroph lineage (UCYN2-fix) | David J Scanlan and Sophie Mazard | Data not expected |
| Relative abundance of total Bacteria and Bacteroidetes by MPN-PCR | John Fry and Kevin Ashelford | Received |
| Size-fractionated nitrate and ammonium uptake rates in the water column (15N-tracing experiments) | Andy Rees | Data not expected |
| Uncultured Bacteroidetes Polymerase Chain Reaction (PCR) score data | John Fry | Received |
| Uncultured cyanobacterial diazotroph nifH and 16S rRNA gene sequences from water samples | David J Scanlan and Sophie Mazard | Received |
| Uncultured phototrophic picoeukaryota and cyanobacteria 16S rRNA gene sequences from water samples | David J Scanlan and Nicholas J Fuller | Received |
| Uptake kinetic of nitrate and ammonium nutrients using 15N tracers | Andy Rees | Data not expected |
