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Metadata Report for BODC Series Reference Number 2135868


Metadata Summary

Data Description

Data Category Water sample data
Instrument Type
NameCategories
Waterproof thermometer  water temperature sensor
Niskin bottle  discrete water samplers
Metrohm 916 Ti Touch compact potentiometric titrator  titrators
Instrument Mounting lowered unmanned submersible
Originating Country United Kingdom
Originator Dr Vassilis Kitidis
Originating Organization Plymouth Marine Laboratory
Processing Status banked
Online delivery of data Download available - Ocean Data View (ODV) format
Project(s) SSB CaNDyFloSS
 

Data Identifiers

Originator's Identifier DY021_CTD_DOXY_2045:198
BODC Series Reference 2135868
 

Time Co-ordinates(UT)

Start Time (yyyy-mm-dd hh:mm) 2015-03-14 11:39
End Time (yyyy-mm-dd hh:mm) -
Nominal Cycle Interval -
 

Spatial Co-ordinates

Latitude 50.57557 N ( 50° 34.5' N )
Longitude 7.10472 W ( 7° 6.3' W )
Positional Uncertainty 0.0 to 0.01 n.miles
Minimum Sensor or Sampling Depth 3.8 m
Maximum Sensor or Sampling Depth 102.6 m
Minimum Sensor or Sampling Height 10.9 m
Maximum Sensor or Sampling Height 109.7 m
Sea Floor Depth 113.5 m
Sea Floor Depth Source BUDS
Sensor or Sampling Distribution Unspecified -
Sensor or Sampling Depth Datum Unspecified -
Sea Floor Depth Datum Unspecified -
 

Parameters

BODC CODERankUnitsTitle
ADEPZZ011MetresDepth (spatial coordinate) relative to water surface in the water body
BOTTFLAG1Not applicableSampling process quality flag (BODC C22)
DOXYWITX1Micromoles per litreConcentration of oxygen {O2 CAS 7782-44-7} per unit volume of the water body [dissolved plus reactive particulate phase] by Winkler titration
OXYTMP011Degrees CelsiusTemperature of oxygen fixation
ROSPOSID1DimensionlessBottle rosette position identifier
SAMPRFNM1DimensionlessSample reference number

Definition of BOTTFLAG

BOTTFLAGDefinition
0The sampling event occurred without any incident being reported to BODC.
1The filter in an in-situ sampling pump physically ruptured during sample resulting in an unquantifiable loss of sampled material.
2Analytical evidence (e.g. surface water salinity measured on a sample collected at depth) indicates that the water sample has been contaminated by water from depths other than the depths of sampling.
3The feedback indicator on the deck unit reported that the bottle closure command had failed. General Oceanics deck units used on NERC vessels in the 80s and 90s were renowned for reporting misfires when the bottle had been closed. This flag is also suitable for when a trigger command is mistakenly sent to a bottle that has previously been fired.
4During the sampling deployment the bottle was fired in an order other than incrementing rosette position. Indicative of the potential for errors in the assignment of bottle firing depth, especially with General Oceanics rosettes.
5Water was reported to be escaping from the bottle as the rosette was being recovered.
6The bottle seals were observed to be incorrectly seated and the bottle was only part full of water on recovery.
7Either the bottle was found to contain no sample on recovery or there was no bottle fitted to the rosette position fired (but SBE35 record may exist).
8There is reason to doubt the accuracy of the sampling depth associated with the sample.
9The bottle air vent had not been closed prior to deployment giving rise to a risk of sample contamination through leakage.

Definition of Rank

  • Rank 1 is a one-dimensional parameter
  • Rank 2 is a two-dimensional parameter
  • Rank 0 is a one-dimensional parameter describing the second dimension of a two-dimensional parameter (e.g. bin depths for moored ADCP data)

Problem Reports

No Problem Report Found in the Database


Data Access Policy

Open Data supplied by Natural Environment Research Council (NERC)

You must always use the following attribution statement to acknowledge the source of the information: "Contains data supplied by Natural Environment Research Council."


Narrative Documents

Metrohm 916 Ti-Touch compact potentiometric titrator

The Metrohm 916 Ti-Touch is a stand-alone potentiometric titrator for dynamic (DET), monotonic (MET), set endpoint (SET) and manual titrations (MAT). The instrument consists of an intergrated buret, rod stirrer (or magnetic stirrer) and dosing system with a live touch control display.

Specifications

Dosing element with intelligent exchange unit 2 x 800 Dosino or 2 x 805 Dosimat
Dosing steps per cylinder content 800 Dosino: 10,000 pulses; 805 Dosimat: 20,000 pulses
Stirrers/Titration stands

Included - 802 rod stirrer

Additional - 1 x 801 magnetic stirrer or 1 x 802 rod stirrer or 1 x 803 KF titration stand

Attachments 2 MSB connectors, 1 sample changer (814, 815) via USB
Temperature sensor Pt1000 or NTC

More information can be found in the manufacturer's product description.

Niskin Bottle

The Niskin bottle is a device used by oceanographers to collect subsurface seawater samples. It is a plastic bottle with caps and rubber seals at each end and is deployed with the caps held open, allowing free-flushing of the bottle as it moves through the water column.

Standard Niskin

The standard version of the bottle includes a plastic-coated metal spring or elastic cord running through the interior of the bottle that joins the two caps, and the caps are held open against the spring by plastic lanyards. When the bottle reaches the desired depth the lanyards are released by a pressure-actuated switch, command signal or messenger weight and the caps are forced shut and sealed, trapping the seawater sample.

Lever Action Niskin

The Lever Action Niskin Bottle differs from the standard version, in that the caps are held open during deployment by externally mounted stainless steel springs rather than an internal spring or cord. Lever Action Niskins are recommended for applications where a completely clear sample chamber is critical or for use in deep cold water.

Clean Sampling

A modified version of the standard Niskin bottle has been developed for clean sampling. This is teflon-coated and uses a latex cord to close the caps rather than a metal spring. The clean version of the Levered Action Niskin bottle is also teflon-coated and uses epoxy covered springs in place of the stainless steel springs. These bottles are specifically designed to minimise metal contamination when sampling trace metals.

Deployment

Bottles may be deployed singly clamped to a wire or in groups of up to 48 on a rosette. Standard bottles and Lever Action bottles have a capacity between 1.7 and 30 L. Reversing thermometers may be attached to a spring-loaded disk that rotates through 180° on bottle closure.

CTD discrete oxygen samples from RRS Discovery Cruise DY021

Originator's Protocol for Data Acquisition and Analysis

Discrete CTD samples were collected from a stainless steel frame CTD and a titanium frame CTD. Dissolved oxygen values were determined by automated Winkler titration with potentiometric end-point (Williams and Jenkinson 1982). The seawater samples were collected directly from the niskin bottles. Details of the stainless steel CTD package can be found here. Details of the titanium CTD package can be found here.

For the stainless steel samples the water was siphoned into 125ml borosilicate glass bottles using silicone tubing. The bottles were made to overflow two to theree times the bottle volume and the samples were immediately fixed using manganese sulphate and alkaline iodide solutions. The samples were then submerged in water until titrations were carried out (within 24 hours). The concentration of thiosulphate was calibrated every two to four days depenedent on sampling activity.

For the titanium samples the niskin bottles were transported to the clean chemistry lab where the sampels were filled using the methods described above. The samples were fixed in a seperate laboratory to avoid contamination.

The fixing temperature was recorded on a NIST-traceable hand-held thermometer.

References

Williams, P. J. LeB, and N. W. Jenkinson (1982): A transportable microprocessor-controlled precise Winkler titration suitable for field station and shipboard use. Limnol. Oceanogr., 27, 576-584.

BODC Data Processing Procedures

Data received were loaded into the BODC database using established BODC data banking procedures. The data were loaded into BODC's database without any changes. Where duplicate oxygen concentration values were supplied the average and standard deviation of oxygen and temperature were calculated and loaded to the database.

The variables supplied by the data originator were mapped to BODC parameter vocabularies as follows:

Originator's Variable Units Description BODC Parameter Code BODC Units Comments
O2_in_situ µmol/L In situ oxygen concentration DOXYWITX µmol/L No unit conversion required
Temp_fix Degrees celsius Oxygen fixation temperature OXYTMP01 Degrees celsius No unit conversion required

Data Quality Report

None (BODC assessment)

Problem Report

None (BODC assessment)


Project Information

Shelf Sea Biogeochemistry (SSB) Programme Work Package 1: CaNDyFloSS

Carbon and Nutrient Dynamics and Fluxes over Shelf Systems (CaNDyFloSS) is a £2.76 million component of the Natural Environment Research Council (NERC) Shelf Sea Biogeochemistry (SSB) research programme, running from 2013 to 2017. It is jointly funded by NERC and the Department for Environment, Food and Rural Affairs (DEFRA). The aim of the research is to perform a comprehensive study of the cycling of nutrients and carbon throughout the water column over the whole north-west European shelf. This will allow the fluxes of nutrients and carbon between the shelf and the deep ocean and atmosphere to be quantified, establishing the role of the north-west European continental shelf in the global carbon cycle.

Background

Shelf seas are the primary regions of human marine resource exploitation, including both renewable and fossil fuel energy sources, recreation, trade and food production. They provide 90% of global fish catches which form an important source of food to much of the global population. They also play an important role in the ecosystem services provided by the oceans as a whole, in particular in storing carbon away from the atmosphere.

Physical and biochemical processes in shelf seas influence the removal of CO2 from the atmosphere and the subsequent storage of carbon in the deep ocean. Biological growth draws carbon out of the water, which is then replaced by carbon in CO2 from the atmosphere. In the shelf seas this growth is supported by terrestrial and open ocean sources of nutrients, implying intimate roles for both the terrestrial biosphere and the open ocean environment in regulating shelf sea climate services. The oceans can also be a major source or sink for other greenhouse gases, including nitrous oxide (N2O), with the shallow shelf sea thought to play a key role.

The spatial extent of the submerged continental shelves varies greatly. The NW European shelf sea is one of the largest and hence is likely to play a significant role in marine biogeochemical cycling, alongside providing a useful model for other systems. However, even in this relatively well studied region, there is a lack of detailed understanding of the principal controls on the cycling of carbon and the major nutrient elements, nitrogen, phosphorus and silicon. Consequently it is also difficult to predict how the cycling of these elements and hence the carbon removal they support may be altered by ongoing and potential future global change. This work package aims to address these uncertainties through a comprehensive study of the cycling of the major nutrients and carbon throughout the water column over the NW European shelf sea system.

Further details are available on the SSB website.

Participants

9 different organisations are directly involved in research for SSB Work Package 1. These institutions are

  • Centre for Environment, Fisheries and Aquaculture Science (Cefas)
  • National Oceanography Centre (NOC)
  • Plymouth Marine Laboratory (PML)
  • Scottish Association for Marine Science (SAMS) / Scottish Marine Institute (SMI)
  • University of Aberdeen
  • University of Bangor
  • University of East Anglia (UEA)
  • University of Liverpool
  • University of Southampton

In addition, there are third party institutions carrying out sampling work for SSB Work Package 1, but who are not involved in the programme itself. These are:

  • The Agri-Food and Biosciences Institute (AFBI)
  • Irish Marine Institute (MI)
  • Marine Science Scotland (MSS)

Objectives

Two overarching objectives are defined for this Work Package.

  • Objective 1: Estimate the size of the continental shelf carbon pump over the whole north-west European shelf.
    This will consist of two principal activities. (1) Over a 12 month period, observations of air-sea CO2 fluxes will be made to provide a synoptic estimate of the magnitude of carbon update by the whole shelf system. (2) Concentrations of carbon (C), nitrogen (N), phosphate (P) and silicate (Si) will be estimated in water flowing on and off the shelf. These estimates will be coupled to estimates of flow and dispersion along the shelf edge, through collaboration with the NERC Fluxes across Sloping Topography of the North East Atlantic (FASTNEt) programme to allow an observational estimate of the net off-shelf transport of C, N, P and Si.

  • Objective 2: Determine the relative importance of external nutrient sources and internal biogeochemical cycling in maintaining the continental shelf pump.
    Estimates of the flux of nutrients and carbon generated in Objective 1 will be used to determine the estimation of any excess of on-shelf nutrient supply, relative to that of carbon. Work Package 1 will then quantify the processes which govern internal biogeochemical cycling by measuring the uptake ratios of N, P, Si and C into phytoplankton and the element and energy balance of organic matter production by autotrophs. Potential modifications to the relative concentrations and uptake of C, N, P and Si in the thermocline and sediment food webs will also be assessed, as will the relative importance of microbial and zooplankton turnover in controlling C, N, P and Si.

Fieldwork and data collection

Data for Objective 1 will be provided using pCO2 systems aboard third party vessels and ferry boxes, along with measurements made through the FASTNEt programme and through the Work Package 1 process cruises detailed below. The third party cruises will be undertaken by Cefas, MI, MSS, University of Bangor and AFBI, spanning the shelf seas and shelf-edges around the United Kingdom and the Republic of Ireland.

The Work Package 1 process cruises will provide data for Objective 1 and Objective 2 and are listed in the table below. The study area is the marine shelf (and shelf-edge) of the Celtic Sea. Work will be carried out on board the NERC research vessels RRS Discovery and RRS James Cook. These cruises will focus on the physics and biogeochemistry of the benthic and pelagic zones of the water column, primarily around four main sampling sites in this area.

Cruise identifier Research ship Cruise dates Work packages
JC105 RRS James Cook June 2014 WP 1, WP 2 and WP 3
DY026 RRS Discovery August 2014 WP1, WP 2 and WP 3
DY018 RRS Discovery November - December 2014 WP 1 and WP 3
DY029 RRS Discovery April 2015 WP 1 and WP 3
DY033 RRS Discovery July 2015 WP 1 and WP 3

Activities will include Conductivity Temperature and Depth (CTD) deployments, Acoustic Doppler Current Profilers (ADCP) surveys, moorings and wire-walker deployments, autonomous gliders and submersible surveys, Marine Snow Catcher particulate matter analysis, plankton net hauls and laboratory incubations with sea water samples.


Data Activity or Cruise Information

Data Activity

Start Date (yyyy-mm-dd) 2015-03-14
End Date (yyyy-mm-dd) 2015-03-14
Organization Undertaking ActivityPlymouth Marine Laboratory
Country of OrganizationUnited Kingdom
Originator's Data Activity IdentifierDY021_CTD_198
Platform Categorylowered unmanned submersible

No Document Information Held for the Series

Related Data Activity activities are detailed in Appendix 1

Cruise

Cruise Name DY021
Departure Date 2015-03-01
Arrival Date 2015-03-26
Principal Scientist(s)E Malcolm S Woodward (Plymouth Marine Laboratory)
Ship RRS Discovery

Complete Cruise Metadata Report is available here


Fixed Station Information

Fixed Station Information

Station NameShelf Seas Biogeochemistry Fixed Station Benthic I
CategoryOffshore area
Latitude50° 34.54' N
Longitude7° 6.33' W
Water depth below MSL108.0 m

Shelf Seas Biogeochemistry Fixed Station Benthic I

This station is one of four benthic sites sampled on the Celtic Sea shelf as part of work package II of the Shelf Seas Biogeochemistry project. The station has a mean water depth 109 m at the following co-ordinates:

Box Corner Latitude Longitude
North-west corner 50.57793° -7.10904°
South-east corner 50.57344° -7.10188°

The position of this station relative to the other Shelf Seas Biogeochemistry sites can be seen from the figure below.

BODC image

Sampling History

DY008
CTD casts -
Box cores 40
SPI camera 5
Stand Alone Pump Systems (SAPS) 1
Benthic flume 1
Multi-cores 1
Autosub6000 1

Related Fixed Station activities are detailed in Appendix 2


BODC Quality Control Flags

The following single character qualifying flags may be associated with one or more individual parameters with a data cycle:

Flag Description
Blank Unqualified
< Below detection limit
> In excess of quoted value
A Taxonomic flag for affinis (aff.)
B Beginning of CTD Down/Up Cast
C Taxonomic flag for confer (cf.)
D Thermometric depth
E End of CTD Down/Up Cast
G Non-taxonomic biological characteristic uncertainty
H Extrapolated value
I Taxonomic flag for single species (sp.)
K Improbable value - unknown quality control source
L Improbable value - originator's quality control
M Improbable value - BODC quality control
N Null value
O Improbable value - user quality control
P Trace/calm
Q Indeterminate
R Replacement value
S Estimated value
T Interpolated value
U Uncalibrated
W Control value
X Excessive difference

SeaDataNet Quality Control Flags

The following single character qualifying flags may be associated with one or more individual parameters with a data cycle:

Flag Description
0 no quality control
1 good value
2 probably good value
3 probably bad value
4 bad value
5 changed value
6 value below detection
7 value in excess
8 interpolated value
9 missing value
A value phenomenon uncertain
B nominal value
Q value below limit of quantification

Appendix 1: DY021_CTD_198

Related series for this Data Activity are presented in the table below. Further information can be found by following the appropriate links.

If you are interested in these series, please be aware we offer a multiple file download service. Should your credentials be insufficient for automatic download, the service also offers a referral to our Enquiries Officer who may be able to negotiate access.

Series IdentifierData CategoryStart date/timeStart positionCruise
2118054Water sample data2015-03-14 11:39:3050.57557 N, 7.10472 WRRS Discovery DY021
2127266Water sample data2015-03-14 11:39:3050.57557 N, 7.10472 WRRS Discovery DY021

Appendix 2: Shelf Seas Biogeochemistry Fixed Station Benthic I

Related series for this Fixed Station are presented in the table below. Further information can be found by following the appropriate links.

If you are interested in these series, please be aware we offer a multiple file download service. Should your credentials be insufficient for automatic download, the service also offers a referral to our Enquiries Officer who may be able to negotiate access.

Series IdentifierData CategoryStart date/timeStart positionCruise
1624264CTD or STD cast2015-03-14 07:16:0050.57547 N, 7.10452 WRRS Discovery DY021
1624276CTD or STD cast2015-03-14 08:27:0050.57547 N, 7.10452 WRRS Discovery DY021
1624528CTD or STD cast2015-03-14 09:32:0050.57553 N, 7.10472 WRRS Discovery DY021
2119672Water sample data2015-03-14 09:38:3050.57555 N, 7.10471 WRRS Discovery DY021
2121676Water sample data2015-03-14 09:38:3050.57555 N, 7.10471 WRRS Discovery DY021
2127402Water sample data2015-03-14 09:38:3050.57555 N, 7.10471 WRRS Discovery DY021
2134343Water sample data2015-03-14 09:38:3050.57555 N, 7.10471 WRRS Discovery DY021
1624288CTD or STD cast2015-03-14 10:39:0050.57553 N, 7.1047 WRRS Discovery DY021
2127254Water sample data2015-03-14 10:43:3050.57555 N, 7.10471 WRRS Discovery DY021
1624307CTD or STD cast2015-03-14 11:33:0050.57557 N, 7.10472 WRRS Discovery DY021
2118054Water sample data2015-03-14 11:39:3050.57557 N, 7.10472 WRRS Discovery DY021
2127266Water sample data2015-03-14 11:39:3050.57557 N, 7.10472 WRRS Discovery DY021
1624319CTD or STD cast2015-03-16 08:52:0050.57593 N, 7.10502 WRRS Discovery DY021
2127278Water sample data2015-03-16 08:59:0050.57592 N, 7.10502 WRRS Discovery DY021
2135881Water sample data2015-03-16 08:59:0050.57592 N, 7.10502 WRRS Discovery DY021
1624805CTD or STD cast2015-05-14 12:35:0050.5763 N, 7.10265 WRRS Discovery DY030
2132428Water sample data2015-05-14 12:47:0050.57632 N, 7.10264 WRRS Discovery DY030
2137783Water sample data2015-05-14 12:47:0050.57632 N, 7.10264 WRRS Discovery DY030
1624817CTD or STD cast2015-05-14 13:48:0050.57629 N, 7.10262 WRRS Discovery DY030
1624621CTD or STD cast2015-05-14 15:23:0050.5763 N, 7.10261 WRRS Discovery DY030
2123394Water sample data2015-05-14 15:34:0050.57628 N, 7.1026 WRRS Discovery DY030
1624842CTD or STD cast2015-05-16 12:32:0050.57541 N, 7.10267 WRRS Discovery DY030
1624854CTD or STD cast2015-05-16 13:43:0050.57542 N, 7.10267 WRRS Discovery DY030
1624866CTD or STD cast2015-05-17 06:49:0050.57515 N, 7.11612 WRRS Discovery DY030
2132465Water sample data2015-05-17 07:03:3050.57516 N, 7.11613 WRRS Discovery DY030
1624878CTD or STD cast2015-05-17 09:03:0050.52219 N, 7.03543 WRRS Discovery DY030
1624891CTD or STD cast2015-05-17 10:10:0050.52218 N, 7.03544 WRRS Discovery DY030
1624633CTD or STD cast2015-05-17 11:17:0050.52219 N, 7.03544 WRRS Discovery DY030
1624909CTD or STD cast2015-05-20 05:13:0050.51989 N, 7.0389 WRRS Discovery DY030
1624910CTD or STD cast2015-05-20 06:50:0050.57217 N, 7.10885 WRRS Discovery DY030
2132490Water sample data2015-05-20 06:59:0050.57216 N, 7.10886 WRRS Discovery DY030
1624922CTD or STD cast2015-05-20 12:39:0050.52056 N, 7.03605 WRRS Discovery DY030
1721600CTD or STD cast2015-08-19 12:12:0050.576 N, 7.10483 WRRS Discovery DY034
2119739Water sample data2015-08-19 12:23:3050.57595 N, 7.10487 WRRS Discovery DY034
1721403CTD or STD cast2015-08-19 13:05:0050.576 N, 7.10483 WRRS Discovery DY034
2122298Water sample data2015-08-19 13:17:3050.57594 N, 7.10487 WRRS Discovery DY034
1721415CTD or STD cast2015-08-20 19:12:0050.57617 N, 7.105 WRRS Discovery DY034
1721476CTD or STD cast2015-08-24 18:54:0050.56845 N, 7.10283 WRRS Discovery DY034
1721507CTD or STD cast2015-08-30 05:01:0050.57247 N, 7.10407 WRRS Discovery DY034