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Metadata Report for BODC Series Reference Number 1358000


Metadata Summary

Data Description

Data Category Hydrography time series at depth
Instrument Type
NameCategories
Star-Oddi Starmon mini temperature recorder  water temperature sensor
Instrument Mounting subsurface mooring
Originating Country United Kingdom
Originator Dr Jo Hopkins
Originating Organization National Oceanography Centre, Liverpool
Processing Status banked
Online delivery of data Download available - Ocean Data View (ODV) format
Project(s) FASTNEt
 

Data Identifiers

Originator's Identifier SG#20130629/SM4138
BODC Series Reference 1358000
 

Time Co-ordinates(UT)

Start Time (yyyy-mm-dd hh:mm) 2013-07-04 12:54
End Time (yyyy-mm-dd hh:mm) 2013-07-19 16:35
Nominal Cycle Interval 60.0 seconds
 

Spatial Co-ordinates

Latitude 55.79640 N ( 55° 47.8' N )
Longitude 8.60758 W ( 8° 36.5' W )
Positional Uncertainty 0.0 to 0.01 n.miles
Minimum Sensor or Sampling Depth 80.52 m
Maximum Sensor or Sampling Depth 80.52 m
Minimum Sensor or Sampling Height 36.71 m
Maximum Sensor or Sampling Height 36.71 m
Sea Floor Depth 117.23 m
Sea Floor Depth Source DATAHEAD
Sensor or Sampling Distribution Fixed common depth - All sensors are grouped effectively at the same depth which is effectively fixed for the duration of the series
Sensor or Sampling Depth Datum Approximate - Depth is only approximate
Sea Floor Depth Datum Approximate - Depth is only approximate
 

Parameters

BODC CODERankUnitsTitle
AADYAA011DaysDate (time from 00:00 01/01/1760 to 00:00 UT on day)
AAFDZZ011DaysTime (time between 00:00 UT and timestamp)
ACYCAA011DimensionlessSequence number
TEMPPR011Degrees CelsiusTemperature of the water body

Definition of Rank

  • Rank 1 is a one-dimensional parameter
  • Rank 2 is a two-dimensional parameter
  • Rank 0 is a one-dimensional parameter describing the second dimension of a two-dimensional parameter (e.g. bin depths for moored ADCP data)

Problem Reports

No Problem Report Found in the Database


Data Access Policy

Open Data supplied by Natural Environment Research Council (NERC)

You must always use the following attribution statement to acknowledge the source of the information: "Contains data supplied by Natural Environment Research Council."


Narrative Documents

Star-Oddi Starmon mini Temperature Recorder

Description

The Star-Oddi Starmon mini is a compact microprocessor-controlled temperature recorder with electronics and probe housed in a strong waterproof cylinder made of either plastic or titanium.

Specifications

Memory 350000 measurements, although memory size can optionally be increased to 524000 or 699000 measurements. Temperature readings are stored in non-volatile Electrically Erasable Programmable Read Only Memory (EEPROM).
Data Retention 20 years.
Temperature Range -2 °C to +40 °C with outside ranges available at request. The average resolution is 0.013 °C, and the measuring accuracy is +/-0.05 °C.
Maximum Depth Plastic version: 400 m (40 bar), titanium version: 11000 m (1100 bar)
Communication Link Downloaded via PC interface box. Connects to a computer via a RS-232C standard serial interface.
Battery A 3.6 V lithium battery with a life of 5 years for a sampling interval of 10 minutes or greater.

For more information please see the manufacturers specification sheet.

Originators Processing RRS James Cook JC088 Site SE and SG Starmon Minilogger Mooring data

Sampling Strategy

RRS James Cook cruise JC088 was the second of two cruises funded for the NERC 'Fluxes Across the Sloping Topography of the North East Atlantic (FASTNEt)' Consortium. JC088 was a 26 day cruise sailing on 28 June 2013 from King George V Dock, Govan to the Malin Shelf edge where in-line and bed frame moorings were deployed before returning to Southampton on 24 July 2013.

Data Processing

In total 45 Starmon Minilogger instruments were deployed at short term in-line moorings SE and SG. The Originator has supplied a full record of calibrated temperatures for each Starmon file supplied. Prior to BODC receiving the data, the data from the instruments had been converted to physical units and collated into a single matrix.

The depth of each logger was estimated based on either the pressure/depth record from the nearest or most appropriate Microcat or the log sheets and /or separations (relative to a subsurface float).

Calibrations

All Starmon Miniloggers were calibrated against CTD cast 69.

The Originator states it was not possible to remove all the smaller scale instances of thermal instability and therefore has left any further corrections (or removal of data) to the end user to make that are appropriate for the type of analysis they wish to perform.

The Originator has created gridded data sets of temperature and pressure from the chains of Starmon Miniloggers and MicroCATs for moorings SE and SG. These gridded data sets have been linearly interpolated onto a one minute grid. The gridded data have not been processed by BODC but are available upon request.

Processing by BODC of RRS James Cook JC088 Site SE and SG Starmon Minilogger Mooring data

Data from 45 Starmon Miniloggers arrived at BODC in Matlab structured files. The data were from two short term in-line moorings at site SE and SG. The data were reformatted to BODC's internal NetCDF format and the following table shows how the variables within the files were mapped to appropriate BODC parameter codes:

Originator's Variable Originators Units Description BODC Parameter Code BODC Units Comment
Temperature °C Temperature of the water body TEMPPR01 °C -

Time drifts of order less than a minute were noted and applied to the whole time series using linear interpolation. Files without the time drift applied have not been processed by BODC but are available on request.

The reformatted data were visualised using BODC's in-house visualisation software. Suspect data were marked by adding an appropriate quality control flag, missing data by both setting the data to an appropriate value and setting the quality control flag.


Project Information

Fluxes Across Sloping Topography of the North East Atlantic (FASTNEt)

Background

The FASTNEt consortium was funded to deliver NERC's Ocean Shelf Edge Exchange Programme. Commencing in October 2011, this four year study aims to couple established observational techniques, such as moorings and CTDs, with the very latest in autonomous sampling initiatives - including use of Autosub Long Range and gliders. With the aid of novel model techniques, these observations will be utilised to construct a new paradigm of Ocean/Shelf exchange.

Shelf edge regions mark the gateway between the world's deep oceans and shallower coastal seas, linking terrestrial, atmospheric and oceanic carbon pools and influencing biogeochemical fluxes. Shelf edge processes can influence near-shore productivity (and fisheries) and ultimately affect global climate.

FASTNEt brings together researchers from multiple UK organisations. Further collaboration has been established with five Project Partners: the UK Met Office, Marine Scotland Science, Agri-Food and Biosciences Institute, Marine Institute Ireland and Scripps Institution of Oceanography.

Scientific Objectives

  • To determine the seasonality of physical gradients and exchange across the shelf edge by deploying new observational technologies (gliders, Autosub Long Range) and established techniques (long term moorings, drifters)
  • To quantify key exchange mechanisms and to collect new data targeted at testing and improving high resolution models of the shelf edge, by carrying out detailed process studies in contrasting regions of the shelf edge of the NE Atlantic margin
  • To develop a new parameterisation of shelf edge exchange processes suitable for regional-scale models, using improved resolution numerical, and new empirical models constrained by the observations
  • To test the new parameterisations in a regional model in the context of making an assessment of inter-annual variability of ocean-shelf exchange.

Fieldwork

Three survey sites on the UK shelf edge have been selected for FASTNEt. These are a) the Celtic Sea shelf edge, b) Malin shelf and c) North Scotland shelf. Fieldwork is centred around two research cruises. The first, to the Celtic Sea, on RRS Discovery in June 2012. The second cruise visits the Malin shelf on RRS James Cook, during summer 2013. In addition to these dedicated cruises, opportunist cruise activity to the North Scotland shelf has been agreed with project partner Marine Scotland Science. Autonomous technologies will complement observations made during the cruises and provide knowledge of seasonal and inter-annual variability in exchange processes.

Instrumentation

Types of instruments/measurements:

  • Gliders
  • Autosub Long Range
  • Drifter buoys
  • Scanfish
  • Microstructure profilers
  • Moored CTD/CT loggers and ADCPs
  • Shipboard measurements: CTD, underway, nutrients (and other discrete sampling), LADCP, ADCP.

Contacts

Collaborator Organisation
Prof. Mark Inall (lead) Scottish Association for Marine Science, U.K
Dr. Jason Holt National Oceanography Centre, U.K
Dr. Peter Miller Plymouth Marine Laboratory, U.K
Dr. Mattias Green Bangor University, U.K
Prof. Jonathan Sharples University of Liverpool, U.K
Dr. Vasyl Vlasenko University of Plymouth, U.K

Data Activity or Cruise Information

Data Activity

Start Date (yyyy-mm-dd) 2013-07-04
End Date (yyyy-mm-dd) 2013-07-19
Organization Undertaking ActivityScottish Association for Marine Science
Country of OrganizationUnited Kingdom
Originator's Data Activity IdentifierJC088_SG
Platform Categorysubsurface mooring

FASTNEt inline mooring SG

The short term mooring SG inline was deployed and recovered during cruise RRS James Cook JC088 as part of the Fluxes Across the Sloping Topography of the North East Atlantic (FASTNEt) project.

Instruments deployed on the mooring

Key

SM STAR-ODDI Starmon mini (Temperature)
MC SBE 37 MicroCAT
A/R Acoustic release

Nominal depth (m) Instrument type Instrument Serial number
18.1 SM 4118
23.1 SM 4139
25.6 SM 4134
26.5 subsurface float -
29.0 MC 2506
31.0 SM 4121
33.5 SM 4137
36.0 SM 4122
38.4 SM 4124
40.9 SM 4131
43.4 MC 2010
45.9 SM 4136
48.3 SM 4128
50.8 SM 4125
54.5 MC 4998
56.9 SM 4133
59.4 SM 4127
61.7 MC 9141
64.2 SM 4123
69.2 SM 4120
74.1 SM 4135
79.1 SM 4138
84.0 SM 4126
89.0 SM 3893
96.4 MC 2081
103.8 SM 3905
106 A/R 1326
118 anchor -

Related Data Activity activities are detailed in Appendix 1

Cruise

Cruise Name JC088
Departure Date 2013-06-28
Arrival Date 2013-07-24
Principal Scientist(s)Mark E Inall (Scottish Association for Marine Science)
Ship RRS James Cook

Complete Cruise Metadata Report is available here


Fixed Station Information


No Fixed Station Information held for the Series


BODC Quality Control Flags

The following single character qualifying flags may be associated with one or more individual parameters with a data cycle:

Flag Description
Blank Unqualified
< Below detection limit
> In excess of quoted value
A Taxonomic flag for affinis (aff.)
B Beginning of CTD Down/Up Cast
C Taxonomic flag for confer (cf.)
D Thermometric depth
E End of CTD Down/Up Cast
G Non-taxonomic biological characteristic uncertainty
H Extrapolated value
I Taxonomic flag for single species (sp.)
K Improbable value - unknown quality control source
L Improbable value - originator's quality control
M Improbable value - BODC quality control
N Null value
O Improbable value - user quality control
P Trace/calm
Q Indeterminate
R Replacement value
S Estimated value
T Interpolated value
U Uncalibrated
W Control value
X Excessive difference

SeaDataNet Quality Control Flags

The following single character qualifying flags may be associated with one or more individual parameters with a data cycle:

Flag Description
0 no quality control
1 good value
2 probably good value
3 probably bad value
4 bad value
5 changed value
6 value below detection
7 value in excess
8 interpolated value
9 missing value
A value phenomenon uncertain
B nominal value
Q value below limit of quantification

Appendix 1: JC088_SG

Related series for this Data Activity are presented in the table below. Further information can be found by following the appropriate links.

If you are interested in these series, please be aware we offer a multiple file download service. Should your credentials be insufficient for automatic download, the service also offers a referral to our Enquiries Officer who may be able to negotiate access.

Series IdentifierData CategoryStart date/timeStart positionCruise
1326950Hydrography time series at depth2013-07-04 12:53:5955.7964 N, 8.60758 WRRS James Cook JC088
1357936Hydrography time series at depth2013-07-04 12:53:5955.7964 N, 8.60758 WRRS James Cook JC088
1326925Hydrography time series at depth2013-07-04 12:54:0055.7964 N, 8.60758 WRRS James Cook JC088
1326937Hydrography time series at depth2013-07-04 12:54:0055.7964 N, 8.60758 WRRS James Cook JC088
1326949Hydrography time series at depth2013-07-04 12:54:0055.7964 N, 8.60758 WRRS James Cook JC088
1326962Hydrography time series at depth2013-07-04 12:54:0155.7964 N, 8.60758 WRRS James Cook JC088
1357807Hydrography time series at depth2013-07-04 12:54:0355.7964 N, 8.60758 WRRS James Cook JC088
1357820Hydrography time series at depth2013-07-04 12:54:0355.7964 N, 8.60758 WRRS James Cook JC088
1357844Hydrography time series at depth2013-07-04 12:54:0355.7964 N, 8.60758 WRRS James Cook JC088
1357985Hydrography time series at depth2013-07-04 12:54:0355.7964 N, 8.60758 WRRS James Cook JC088
1357819Hydrography time series at depth2013-07-04 12:54:0455.7964 N, 8.60758 WRRS James Cook JC088
1357924Hydrography time series at depth2013-07-04 12:54:0455.7964 N, 8.60758 WRRS James Cook JC088
1357961Hydrography time series at depth2013-07-04 12:54:0455.7964 N, 8.60758 WRRS James Cook JC088
1357832Hydrography time series at depth2013-07-04 12:54:0555.7964 N, 8.60758 WRRS James Cook JC088
1357912Hydrography time series at depth2013-07-04 12:54:0555.7964 N, 8.60758 WRRS James Cook JC088
1357948Hydrography time series at depth2013-07-04 12:54:0555.7964 N, 8.60758 WRRS James Cook JC088
1357997Hydrography time series at depth2013-07-04 12:54:0555.7964 N, 8.60758 WRRS James Cook JC088
1357856Hydrography time series at depth2013-07-04 12:54:0655.7964 N, 8.60758 WRRS James Cook JC088
1357881Hydrography time series at depth2013-07-04 12:54:0755.7964 N, 8.60758 WRRS James Cook JC088
1357893Hydrography time series at depth2013-07-04 12:54:0755.7964 N, 8.60758 WRRS James Cook JC088
1357868Hydrography time series at depth2013-07-04 12:54:0855.7964 N, 8.60758 WRRS James Cook JC088
1357900Hydrography time series at depth2013-07-04 12:54:0855.7964 N, 8.60758 WRRS James Cook JC088
1357973Hydrography time series at depth2013-07-04 12:54:0855.7964 N, 8.60758 WRRS James Cook JC088
1358012Hydrography time series at depth2013-07-04 12:54:0955.7964 N, 8.60758 WRRS James Cook JC088