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Metadata Report for BODC Series Reference Number 1653060


Metadata Summary

Data Description

Data Category Water sample data
Instrument Type
NameCategories
Non-toxic sea water supply  continuous water samplers
Instrument Mounting research vessel
Originating Country United Kingdom
Originator Dr Ray Barlow
Originating Organization Plymouth Marine Laboratory
Processing Status banked
Online delivery of data Download available - Ocean Data View (ODV) format
Project(s) ARABESQUE
 

Data Identifiers

Originator's Identifier DI210_GPUMP_PIGX_5:
BODC Series Reference 1653060
 

Time Co-ordinates(UT)

Start Time (yyyy-mm-dd hh:mm) 1994-09-02 17:57
End Time (yyyy-mm-dd hh:mm) 1994-09-19 20:00
Nominal Cycle Interval -
 

Spatial Co-ordinates

Southernmost Latitude 7.90574 N ( 7° 54.3' N )
Northernmost Latitude 21.22846 N ( 21° 13.7' N )
Westernmost Longitude 58.97711 E ( 58° 58.6' E )
Easternmost Longitude 67.08670 E ( 67° 5.2' E )
Positional Uncertainty Unspecified
Minimum Sensor or Sampling Depth 5.0 m
Maximum Sensor or Sampling Depth 5.0 m
Minimum Sensor or Sampling Height -
Maximum Sensor or Sampling Height -
Sea Floor Depth -
Sea Floor Depth Source -
Sensor or Sampling Distribution Unspecified -
Sensor or Sampling Depth Datum Unspecified -
Sea Floor Depth Datum Unspecified -
 

Parameters

BODC CODERankUnitsTitle
AADYAA011DaysDate (time from 00:00 01/01/1760 to 00:00 UT on day)
AAFDZZ011DaysTime (time between 00:00 UT and timestamp)
ALATGP011DegreesLatitude north relative to WGS84 by unspecified GPS system
ALLOHPP11Nanograms per litreConcentration of alloxanthin {CAS 28380-31-6} per unit volume of the water body [particulate >GF/F phase] by filtration, acetone extraction and high performance liquid chromatography (HPLC)
ALONGP011DegreesLongitude east relative to WGS84 by unspecified GPS system
BUTAHPP11Nanograms per litreConcentration of 19'-butanoyloxyfucoxanthin {But-fuco(BF) CAS 111234-30-1} per unit volume of the water body [particulate >GF/F phase] by filtration, acetone extraction and high performance liquid chromatography (HPLC)
C1C2HPP11Nanograms per litreConcentration of chlorophyll-c1+c2 per unit volume of the water body [particulate >GF/F phase] by filtration, acetone extraction and high performance liquid chromatography (HPLC)
CHLBHPP11Nanograms per litreConcentration of chlorophyll-b {chl-b CAS 519-62-0} per unit volume of the water body [particulate >GF/F phase] by filtration, acetone extraction and high performance liquid chromatography (HPLC)
CLC3HPP11Nanograms per litreConcentration of chlorophyll-c3 {chl-c3} per unit volume of the water body [particulate >GF/F phase] by filtration, acetone extraction and high performance liquid chromatography (HPLC)
CPHLHPP11Milligrams per cubic metreConcentration of chlorophyll-a {chl-a CAS 479-61-8} per unit volume of the water body [particulate >GF/F phase] by filtration, acetone extraction and high performance liquid chromatography (HPLC)
DIADHPP11Nanograms per litreConcentration of diadinoxanthin {CAS 18457-54-0} per unit volume of the water body [particulate >GF/F phase] by filtration, acetone extraction and high performance liquid chromatography (HPLC)
DVCAHPP11Nanograms per litreConcentration of divinyl chlorophyll-a {DVchl-a} per unit volume of the water body [particulate >GF/F phase] by filtration, acetone extraction and high performance liquid chromatography (HPLC)
FUCXHPP11Nanograms per litreConcentration of fucoxanthin {CAS 3351-86-8} per unit volume of the water body [particulate >GF/F phase] by filtration, acetone extraction and high performance liquid chromatography (HPLC)
HEXOHPP11Nanograms per litreConcentration of 19'-hexanoyloxyfucoxanthin {CAS 60147-85-5} per unit volume of the water body [particulate >GF/F phase] by filtration, acetone extraction and high performance liquid chromatography (HPLC)
PERIHPP11Nanograms per litreConcentration of peridinin {CAS 33281-81-1} per unit volume of the water body [particulate >GF/F phase] by filtration, acetone extraction and high performance liquid chromatography (HPLC)
ZEOXHPP11Nanograms per litreConcentration of zeaxanthin {CAS 144-68-3} per unit volume of the water body [particulate >GF/F phase] by filtration, acetone extraction and high performance liquid chromatography (HPLC)

Definition of Rank

  • Rank 1 is a one-dimensional parameter
  • Rank 2 is a two-dimensional parameter
  • Rank 0 is a one-dimensional parameter describing the second dimension of a two-dimensional parameter (e.g. bin depths for moored ADCP data)

Problem Reports

No Problem Report Found in the Database


Data Access Policy

Open Data

These data have no specific confidentiality restrictions for users. However, users must acknowledge data sources as it is not ethical to publish data without proper attribution. Any publication or other output resulting from usage of the data should include an acknowledgment.

If the Information Provider does not provide a specific attribution statement, or if you are using Information from several Information Providers and multiple attributions are not practical in your product or application, you may consider using the following:

"Contains public sector information licensed under the Open Government Licence v1.0."


Narrative Documents

Pigments as part of the ARABESQUE project

Parameter Code Definitions

CPHLFLP1 Fluorometric chlorophyll-a µg/litre
Fluorometric assay of acetone extract (GF/F filtered)
CPHLHPP1 HPLC chlorophyll a µg/litre
Reverse-phase HPLC assay of acetone extract (GF/F filtered)
CPHLPR01 Calibrated CTD chlorophyll µg/litre
Aquatrakka fluorometer calibrated against HPLC samples
ALLOHPP1 Alloxanthin µg/litre
Reverse-phase HPLC assay of acetone extract (GF/F filtered)
BUTAHPP1 Butanoyloxyfucoxanthin µg/litre
Reverse-phase HPLC assay of acetone extract (GF/F filtered)
C1C2HPP1 Chlorophyll c1c2 µg/litre
Reverse-phase HPLC assay of acetone extract (GF/F filtered)
CHLBHPP1 Chlorophyll b µg/litre
Reverse-phase HPLC assay of acetone extract (GF/F filtered)
CLC3HPP1 Chlorophyll c3 µg/litre
Reverse-phase HPLC assay of acetone extract (GF/F filtered)
DIADHPP1 Diadinoxanthin µg/litre
Reverse-phase HPLC assay of acetone extract (GF/F filtered)
DVCAHPP1 Diavinyl chlorophyll a µg/litre
Reverse-phase HPLC assay of acetone extract (GF/F filtered)
FUCXHPP1 Fucoxanthin µg/litre
Reverse-phase HPLC assay of acetone extract (GF/F filtered)
HEXOHPP1 Hexanoyloxyfucoxanthin µg/litre
Reverse-phase HPLC assay of acetone extract (GF/F filtered)
PBA1HPP1 Phaeophorbide-a1 µg/litre
Reverse-phase HPLC assay of acetone extract (GF/F filtered)
PBA2HPP1 Phaeophorbide-a2 µg/litre
Reverse-phase HPLC assay of acetone extract (GF/F filtered)
PBA3HPP1 Phaeophorbide-a3 µg/litre
Reverse-phase HPLC assay of acetone extract (GF/F filtered)
PBA4HPP1 Phaeophorbide-a4 µg/litre
Reverse-phase HPLC assay of acetone extract (GF/F filtered)
PERIHPP1 Peridinin µg/litre
Reverse-phase HPLC assay of acetone extract (GF/F filtered)
PTA1HPP1 Phaeophytin-a1 µg/litre
Reverse-phase HPLC assay of acetone extract (GF/F filtered)
PTA2HPP1 Phaeophytin-a2 µg/litre
Reverse-phase HPLC assay of acetone extract (GF/F filtered)
ZEOXHPP1 Zeaxanthin µg/litre
Reverse-phase HPLC assay of acetone extract (GF/F filtered)

Originator Code Definitions

5 Dr R. Barlow Plymouth Marine Laboratory

Originator Protocols

Samples of one to two litres were taken from all shallow biogeochemistry CTD casts, filtered onto GF/F filters and immediately frozen in liquid nitrogen. The filters were extracted into 90% acetone, an aliquot was taken and injected onto a C-8 reverse phase column for high pressure liquid chromatographic (HPLC) separation and quantification of some 20 chlorophyll and carotenoid pigments, using both absorbance at 440nm and fluorescence (excitation at 405nm, emission at 670nm) detection.

Non-toxic (underway) sea water supply

A source of uncontaminated near-surface (commonly 3 to 7 m) seawater pumped continuously to shipboard laboratories on research vessels. There is typically a temperature sensor near the intake (known as the hull temperature) to provide measurements that are as close as possible to the ambient water temperature. The flow from the supply is typically directed through continuously logged sensors such as a thermosalinograph and a fluorometer. Water samples are often collected from the non-toxic supply. The system is also referred to as the underway supply.


Project Information

ARABESQUE

ARABESQUE was a multidisciplinary oceanographic research project focused on the Arabian Sea and Northwest Indian Ocean during the monsoon and intermonsoon season in 1994. Funding for ARABESQUE was provided by the Ministry of Defence/ Defence Research Agency Joint Grant TQ/10/3/2 and Amersham International as well as the Natural Environment Research Council. ARABESQUE was almost entirely field based with extensive physical, chemical and biological measurements made in the Gulf of Oman, the Arabian Sea and the Northwest Indian Ocean. The aim of the project was to study the upper ocean microbial biogeochemistry in the Arabian Sea. Its focus was carbon and nitrogen cycling processes linked to climate change. The project was a UK contribution to the Joint Global Ocean Flux Study (JGOFS) Process Studies of the Arabian Sea. ARABESQUE was organised by Plymouth Marine Laboratory (PML).

Objectives

The detailed scientific objectives of ARABESQUE were to quantify the seasonal influence of the Monsoon winds in the Arabian Sea on:

  • Upwelling of nutrients and the resultant production and fate of phytoplankton, in terms of size-fractionated, new and regenerated production

  • Vertical and on-shelf gradients of heterotrophic, methanogenic and denitrifying bacteria

  • Distribution of chemotaxonomic pigments with links to optical properties of seawater

  • The Dissolved Inorganic and Organic Carbon cycle

  • Air-sea exchange of Sulphur and Nitrogen biogases including dimethyl sulphide, methylamines and methane

  • Sedimentation rates and the fate of organic matter through the oxygen depleted zone

A final objective was to calibrate satellite data on ocean colour so as to map the biogeochemistry of the northwestern Indian Ocean.

Fieldwork

The fieldwork programme consisted of two cruises of RRS Discovery. Cruise 210 (from 27 August to 4 October 1994) was timed to coincide with the South West Monsoon. Cruise 212 (from 16 November to 19 December 1994) took place during the intermonsoon period through to the onset of the North East Monsoon. The fieldwork programme included three repeated sections;

  • One section along the Gulf of Oman

  • A section at 8°N 67°E to 14° 30N 67°E

  • A major section from 8°N 67°E to the coast of Oman

Other one-off sections were also crossed in the area. Sections were covered by underway upper ocean measurements and by a total of 21 sites where CTD/water-bottle stations were taken, 14 of which were repeated.

Data Management

Data management services to the ARABESQUE project were provided by the British Oceanographic Data Centre, funded by the UK Natural Environment Research Council.


Data Activity or Cruise Information

Cruise

Cruise Name D210
Departure Date 1994-08-25
Arrival Date 1994-10-05
Principal Scientist(s)R Fauzi C Mantoura (Plymouth Marine Laboratory)
Ship RRS Discovery

Complete Cruise Metadata Report is available here


Fixed Station Information


No Fixed Station Information held for the Series


BODC Quality Control Flags

The following single character qualifying flags may be associated with one or more individual parameters with a data cycle:

Flag Description
Blank Unqualified
< Below detection limit
> In excess of quoted value
A Taxonomic flag for affinis (aff.)
B Beginning of CTD Down/Up Cast
C Taxonomic flag for confer (cf.)
D Thermometric depth
E End of CTD Down/Up Cast
G Non-taxonomic biological characteristic uncertainty
H Extrapolated value
I Taxonomic flag for single species (sp.)
K Improbable value - unknown quality control source
L Improbable value - originator's quality control
M Improbable value - BODC quality control
N Null value
O Improbable value - user quality control
P Trace/calm
Q Indeterminate
R Replacement value
S Estimated value
T Interpolated value
U Uncalibrated
W Control value
X Excessive difference

SeaDataNet Quality Control Flags

The following single character qualifying flags may be associated with one or more individual parameters with a data cycle:

Flag Description
0 no quality control
1 good value
2 probably good value
3 probably bad value
4 bad value
5 changed value
6 value below detection
7 value in excess
8 interpolated value
9 missing value
A value phenomenon uncertain
B nominal value
Q value below limit of quantification