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Metadata Report for BODC Series Reference Number 1875230


Metadata Summary

Data Description

Data Category Water sample data
Instrument Type
NameCategories
Niskin bottle  discrete water samplers
TitraLab TIM90, ABU91/ABU93 automated titration system  titrators
Instrument Mounting lowered unmanned submersible
Originating Country United Kingdom
Originator Dr Stefan Gary
Originating Organization Scottish Association for Marine Science
Processing Status banked
Online delivery of data Download available - Ocean Data View (ODV) format
Project(s) -
 

Data Identifiers

Originator's Identifier DY052_CTD_DOXY_4796:CTD089
BODC Series Reference 1875230
 

Time Co-ordinates(UT)

Start Time (yyyy-mm-dd hh:mm) 2016-06-23 06:43
End Time (yyyy-mm-dd hh:mm) -
Nominal Cycle Interval -
 

Spatial Co-ordinates

Latitude 57.55040 N ( 57° 33.0' N )
Longitude 11.08227 W ( 11° 4.9' W )
Positional Uncertainty 0.0 to 0.01 n.miles
Minimum Sensor or Sampling Depth 5.0 m
Maximum Sensor or Sampling Depth 692.8 m
Minimum Sensor or Sampling Height 54.8 m
Maximum Sensor or Sampling Height 742.6 m
Sea Floor Depth 747.6 m
Sea Floor Depth Source PEVENT
Sensor or Sampling Distribution Unspecified -
Sensor or Sampling Depth Datum Unspecified -
Sea Floor Depth Datum Instantaneous - Depth measured below water line or instantaneous water body surface
 

Parameters

BODC CODERankUnitsTitle
ADEPZZ011MetresDepth (spatial coordinate) relative to water surface in the water body
BOTTFLAG1Not applicableSampling process quality flag (BODC C22)
DOKGWITX1Micromoles per kilogramConcentration of oxygen {O2 CAS 7782-44-7} per unit mass of the water body [dissolved plus reactive particulate phase] by Winkler titration
ROSPOSID1DimensionlessBottle rosette position identifier
SAMPRFNM1DimensionlessSample reference number

Definition of BOTTFLAG

BOTTFLAGDefinition
0The sampling event occurred without any incident being reported to BODC.
1The filter in an in-situ sampling pump physically ruptured during sample resulting in an unquantifiable loss of sampled material.
2Analytical evidence (e.g. surface water salinity measured on a sample collected at depth) indicates that the water sample has been contaminated by water from depths other than the depths of sampling.
3The feedback indicator on the deck unit reported that the bottle closure command had failed. General Oceanics deck units used on NERC vessels in the 80s and 90s were renowned for reporting misfires when the bottle had been closed. This flag is also suitable for when a trigger command is mistakenly sent to a bottle that has previously been fired.
4During the sampling deployment the bottle was fired in an order other than incrementing rosette position. Indicative of the potential for errors in the assignment of bottle firing depth, especially with General Oceanics rosettes.
5Water was reported to be escaping from the bottle as the rosette was being recovered.
6The bottle seals were observed to be incorrectly seated and the bottle was only part full of water on recovery.
7Either the bottle was found to contain no sample on recovery or there was no bottle fitted to the rosette position fired (but SBE35 record may exist).
8There is reason to doubt the accuracy of the sampling depth associated with the sample.
9The bottle air vent had not been closed prior to deployment giving rise to a risk of sample contamination through leakage.

Definition of Rank

  • Rank 1 is a one-dimensional parameter
  • Rank 2 is a two-dimensional parameter
  • Rank 0 is a one-dimensional parameter describing the second dimension of a two-dimensional parameter (e.g. bin depths for moored ADCP data)

Problem Reports

No Problem Report Found in the Database


Data Access Policy

Open Data supplied by Natural Environment Research Council (NERC)

You must always use the following attribution statement to acknowledge the source of the information: "Contains data supplied by Natural Environment Research Council."


Narrative Documents

TitraLab TIM90, ABU91/ABU93 Automated Titration System

A modular, automated titration system for the laboratory. This includes a TIM90 titration manager, which can manage up to 3 burettes and store 40 methods; and either an ABU 91 Autoburette (one burette), or an ABU 93 Triburette (three burettes), both with 1 ml, 5 ml, 10 ml and 25 ml selectable quantities.

Niskin Bottle

The Niskin bottle is a device used by oceanographers to collect subsurface seawater samples. It is a plastic bottle with caps and rubber seals at each end and is deployed with the caps held open, allowing free-flushing of the bottle as it moves through the water column.

Standard Niskin

The standard version of the bottle includes a plastic-coated metal spring or elastic cord running through the interior of the bottle that joins the two caps, and the caps are held open against the spring by plastic lanyards. When the bottle reaches the desired depth the lanyards are released by a pressure-actuated switch, command signal or messenger weight and the caps are forced shut and sealed, trapping the seawater sample.

Lever Action Niskin

The Lever Action Niskin Bottle differs from the standard version, in that the caps are held open during deployment by externally mounted stainless steel springs rather than an internal spring or cord. Lever Action Niskins are recommended for applications where a completely clear sample chamber is critical or for use in deep cold water.

Clean Sampling

A modified version of the standard Niskin bottle has been developed for clean sampling. This is teflon-coated and uses a latex cord to close the caps rather than a metal spring. The clean version of the Levered Action Niskin bottle is also teflon-coated and uses epoxy covered springs in place of the stainless steel springs. These bottles are specifically designed to minimise metal contamination when sampling trace metals.

Deployment

Bottles may be deployed singly clamped to a wire or in groups of up to 48 on a rosette. Standard bottles and Lever Action bottles have a capacity between 1.7 and 30 L. Reversing thermometers may be attached to a spring-loaded disk that rotates through 180° on bottle closure.

DY052 discrete CTD salinity, inorganic nutrients and dissolved oxygen samples

Originator's Protocol for Data Acquisition and Analysis

The following information contains extracts from the DY052 cruise report.

Discrete samples were taken from the majority of the 89 CTD casts made during the DY052 Extended Ellet Line cruise. The samples were taken to measure salinity, dissolved oxygen and nutrient concentrations and were analysed as follows:

Salinity

Salinity samples were drawn from each unique depth. When two bottles were fired at the same depth only one bottle was sampled. Bottle samples were collected after oxygen and carbon into glass bottles with plastic inserts and caps. Some bottles on the Scottish Shelf east of Barra were not sampled due to the strong salinity signals on the shelf and to reduce Autosal operator workload when arriving in port. For each sample, the bottle and cap was rinsed three times and then filled with sample. The neck, threads, and cap were carefully dried, to prevent salt crystals from forming around the opening, and the insert and cap were put on the bottle for storage. Filled salt bottles were placed in the Autosal lab and allowed a minimum of 24 hours to reach the ambient lab temperature before analysis on the Autosal.

Oxygen

Dissolved oxygen concentrations were measured using the seawater samples. Sampling and analysis were performed 24hrs a day from every CTD cast using Winkler photometric auto-titration. Methodologies followed those documented in GO-SHIP protocols (Langdon,2010) and based on the standard methodologies of Carpenter 1965 adapted for large scale hydrographic studies (e.g. Culberson, 1991 and Dickson, 1995).

Nutrients

Nutrient samples were collected in 50ml acid pre-cleaned polythene vials directly from the CTD spigots without the use of a tube and using a single half-full rinse prior to collection. Samples were always analyzed within 24 hours of collection and stored in low light conditions at room temperature prior to analysis if analysis time exceeded eight hours after collection time. Measurement was conducted using a Lachat QuikChem 8500 flow injection autoanalyser (Hach Lange). After analysis, the 50ml tubes were double rinsed and reused for subsequent CTD sample collection.

BODC Data Processing Procedures

The sample data were supplied to BODC in an MSTAR format. This file format was converted to ASCII and data were loaded into BODC's ocean database under the ORACLE Relational Database Management System without modification. There were no replicates and no flags were added to the data.

Originator's Variable Units Description BODC Parameter Code Units Comments
Botpsal psu Practical salinity of the water body by bench salinometer and computation using UNESCO 1983 algorithm PSALBSTX psu -
Botoxy µmol/kg Concentration of oxygen {O2 CAS 7782-44-7} per unit mass of the water body [dissolved plus reactive particulate phase] by Winkler titration DOKGWITX µmol/kg -
Silc µmol/l Concentration of silicate {SiO44- CAS 17181-37-2} per unit volume of the water body [dissolved plus reactive particulate phase] by colorimetric autoanalysis SLCAAATX µmol/l -
Phos µmol/l Concentration of phosphate {PO4} per unit volume of the water body [unknown phase] by colorimetric autoanalysis PHOSAATX µmol/l -
Totnit µmol/l Concentration of nitrate+nitrite {NO3+NO2} per unit volume of the water body [unknown phase] by colorimetric autoanalysis NTRZAATX µmol/l -

Data Quality Report

There are a few instances where data exists in the Mstar file where no bottle was fired and so has no corresponding depth. This occurred three times for nutrients and once for oxygen. Without being able to confirm the cast and bottle these samples came from BODC have not been able to load the data to the BODC database. Below are these instances -

  • Cast 19, bottle 23 (Silc -0.18, Phos 0.26, Totnit 4.7 (µmol/l))
  • Cast 24, bottle 17 (Silc 0.95, Phos 0.2, Totnit 2.23 (µmol/l))
  • Cast 63, bottle 12 (Silc 0.56, Phos 0.04, Totnit 0.05 (µmol/l))
  • Cast 28, bottle 2 (Botoxy 239.21µmol/kg)

Project Information


No Project Information held for the Series

Data Activity or Cruise Information

Data Activity

Start Date (yyyy-mm-dd) 2016-06-23
End Date (yyyy-mm-dd) 2016-06-23
Organization Undertaking ActivityScottish Association for Marine Science
Country of OrganizationUnited Kingdom
Originator's Data Activity IdentifierDY052_CTD_CTD089
Platform Categorylowered unmanned submersible

No Document Information Held for the Series

Related Data Activity activities are detailed in Appendix 1

Cruise

Cruise Name DY052
Departure Date 2016-06-07
Arrival Date 2016-06-24
Principal Scientist(s)Stefan F Gary (Scottish Association for Marine Science)
Ship RRS Discovery

Complete Cruise Metadata Report is available here


Fixed Station Information


No Fixed Station Information held for the Series


BODC Quality Control Flags

The following single character qualifying flags may be associated with one or more individual parameters with a data cycle:

Flag Description
Blank Unqualified
< Below detection limit
> In excess of quoted value
A Taxonomic flag for affinis (aff.)
B Beginning of CTD Down/Up Cast
C Taxonomic flag for confer (cf.)
D Thermometric depth
E End of CTD Down/Up Cast
G Non-taxonomic biological characteristic uncertainty
H Extrapolated value
I Taxonomic flag for single species (sp.)
K Improbable value - unknown quality control source
L Improbable value - originator's quality control
M Improbable value - BODC quality control
N Null value
O Improbable value - user quality control
P Trace/calm
Q Indeterminate
R Replacement value
S Estimated value
T Interpolated value
U Uncalibrated
W Control value
X Excessive difference

SeaDataNet Quality Control Flags

The following single character qualifying flags may be associated with one or more individual parameters with a data cycle:

Flag Description
0 no quality control
1 good value
2 probably good value
3 probably bad value
4 bad value
5 changed value
6 value below detection
7 value in excess
8 interpolated value
9 missing value
A value phenomenon uncertain
B nominal value
Q value below limit of quantification

Appendix 1: DY052_CTD_CTD089

Related series for this Data Activity are presented in the table below. Further information can be found by following the appropriate links.

If you are interested in these series, please be aware we offer a multiple file download service. Should your credentials be insufficient for automatic download, the service also offers a referral to our Enquiries Officer who may be able to negotiate access.

Series IdentifierData CategoryStart date/timeStart positionCruise
2149772Water sample data2016-06-23 06:43:1957.5504 N, 11.08227 WRRS Discovery DY052