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Metadata Report for BODC Series Reference Number 1916882


Metadata Summary

Data Description

Data Category Water sample data
Instrument Type
NameCategories
Niskin bottle  discrete water samplers
Metrohm 916 Ti Touch compact potentiometric titrator  titrators
Instrument Mounting lowered unmanned submersible
Originating Country United Kingdom
Originator Dr Sue Hartman
Originating Organization National Oceanography Centre, Southampton
Processing Status banked
Online delivery of data Download available - Ocean Data View (ODV) format
Project(s) CLASS Project
 

Data Identifiers

Originator's Identifier JC165_CTD_DOXY_699:JC165-032
BODC Series Reference 1916882
 

Time Co-ordinates(UT)

Start Time (yyyy-mm-dd hh:mm) 2018-05-29 14:08
End Time (yyyy-mm-dd hh:mm) -
Nominal Cycle Interval -
 

Spatial Co-ordinates

Latitude 48.00093 N ( 48° 0.1' N )
Longitude 16.50327 W ( 16° 30.2' W )
Positional Uncertainty 0.0 to 0.01 n.miles
Minimum Sensor or Sampling Depth 34.7 m
Maximum Sensor or Sampling Depth 4829.4 m
Minimum Sensor or Sampling Height -20.4 m
Maximum Sensor or Sampling Height 4774.3 m
Sea Floor Depth 4809.0 m
Sea Floor Depth Source SCILOG
Sensor or Sampling Distribution Unspecified -
Sensor or Sampling Depth Datum Unspecified -
Sea Floor Depth Datum Instantaneous - Depth measured below water line or instantaneous water body surface
 

Parameters

BODC CODERankUnitsTitle
ADEPZZ011MetresDepth (spatial coordinate) relative to water surface in the water body
BOTTFLAG1Not applicableSampling process quality flag (BODC C22)
DOXYWITX1Micromoles per litreConcentration of oxygen {O2 CAS 7782-44-7} per unit volume of the water body [dissolved plus reactive particulate phase] by Winkler titration
ROSPOSID1DimensionlessBottle rosette position identifier
SAMPRFNM1DimensionlessSample reference number
SDOXWITX1Micromoles per litreConcentration standard deviation of oxygen {O2 CAS 7782-44-7} per unit volume of the water body [dissolved plus reactive particulate phase] by Winkler titration

Definition of BOTTFLAG

BOTTFLAGDefinition
0The sampling event occurred without any incident being reported to BODC.
1The filter in an in-situ sampling pump physically ruptured during sample resulting in an unquantifiable loss of sampled material.
2Analytical evidence (e.g. surface water salinity measured on a sample collected at depth) indicates that the water sample has been contaminated by water from depths other than the depths of sampling.
3The feedback indicator on the deck unit reported that the bottle closure command had failed. General Oceanics deck units used on NERC vessels in the 80s and 90s were renowned for reporting misfires when the bottle had been closed. This flag is also suitable for when a trigger command is mistakenly sent to a bottle that has previously been fired.
4During the sampling deployment the bottle was fired in an order other than incrementing rosette position. Indicative of the potential for errors in the assignment of bottle firing depth, especially with General Oceanics rosettes.
5Water was reported to be escaping from the bottle as the rosette was being recovered.
6The bottle seals were observed to be incorrectly seated and the bottle was only part full of water on recovery.
7Either the bottle was found to contain no sample on recovery or there was no bottle fitted to the rosette position fired (but SBE35 record may exist).
8There is reason to doubt the accuracy of the sampling depth associated with the sample.
9The bottle air vent had not been closed prior to deployment giving rise to a risk of sample contamination through leakage.

Definition of Rank

  • Rank 1 is a one-dimensional parameter
  • Rank 2 is a two-dimensional parameter
  • Rank 0 is a one-dimensional parameter describing the second dimension of a two-dimensional parameter (e.g. bin depths for moored ADCP data)

Problem Reports

No Problem Report Found in the Database


Data Access Policy

Open Data supplied by Natural Environment Research Council (NERC)

You must always use the following attribution statement to acknowledge the source of the information: "Contains data supplied by Natural Environment Research Council."


Narrative Documents

Metrohm 916 Ti-Touch compact potentiometric titrator

The Metrohm 916 Ti-Touch is a stand-alone potentiometric titrator for dynamic (DET), monotonic (MET), set endpoint (SET) and manual titrations (MAT). The instrument consists of an intergrated buret, rod stirrer (or magnetic stirrer) and dosing system with a live touch control display.

Specifications

Dosing element with intelligent exchange unit 2 x 800 Dosino or 2 x 805 Dosimat
Dosing steps per cylinder content 800 Dosino: 10,000 pulses; 805 Dosimat: 20,000 pulses
Stirrers/Titration stands

Included - 802 rod stirrer

Additional - 1 x 801 magnetic stirrer or 1 x 802 rod stirrer or 1 x 803 KF titration stand

Attachments 2 MSB connectors, 1 sample changer (814, 815) via USB
Temperature sensor Pt1000 or NTC

More information can be found in the manufacturer's product description.

Niskin Bottle

The Niskin bottle is a device used by oceanographers to collect subsurface seawater samples. It is a plastic bottle with caps and rubber seals at each end and is deployed with the caps held open, allowing free-flushing of the bottle as it moves through the water column.

Standard Niskin

The standard version of the bottle includes a plastic-coated metal spring or elastic cord running through the interior of the bottle that joins the two caps, and the caps are held open against the spring by plastic lanyards. When the bottle reaches the desired depth the lanyards are released by a pressure-actuated switch, command signal or messenger weight and the caps are forced shut and sealed, trapping the seawater sample.

Lever Action Niskin

The Lever Action Niskin Bottle differs from the standard version, in that the caps are held open during deployment by externally mounted stainless steel springs rather than an internal spring or cord. Lever Action Niskins are recommended for applications where a completely clear sample chamber is critical or for use in deep cold water.

Clean Sampling

A modified version of the standard Niskin bottle has been developed for clean sampling. This is teflon-coated and uses a latex cord to close the caps rather than a metal spring. The clean version of the Levered Action Niskin bottle is also teflon-coated and uses epoxy covered springs in place of the stainless steel springs. These bottles are specifically designed to minimise metal contamination when sampling trace metals.

Deployment

Bottles may be deployed singly clamped to a wire or in groups of up to 48 on a rosette. Standard bottles and Lever Action bottles have a capacity between 1.7 and 30 L. Reversing thermometers may be attached to a spring-loaded disk that rotates through 180° on bottle closure.

JC165 CTD Bottle Oxygen Sample Processing

Originator's Protocol for Data Acquisition and Analysis

During CTD deployments 20L Niskin bottles were fired at a variety of depths. Samples were extracted from each bottle for Oxygen analysis. These oxygen readings were used to calibrate the CTDs oxygen sensor.

In total 100 samples from 13 CTD stations were analysed for dissolved oxygen using a modified Winkler technique. An amperometric end point method was used, following the titration using an electrode to a set end point. Thiosulphate titrant was delivered using the new Metrohm 916 Ti-Touch compact potentiometric titrator (full duplicates were taken on cast 03 to check the Ti-touch alongside the Titrino 794, the results were identical and the Ti-touch was used throughout the rest of JC165). The method was standardised using 1ml additions of 0.01N OSIL iodate (3 bottles were used during JC165). The normality of the thiosulphate was 0.0987 ± 0.0007.

Duplicate samples were taken on each cast (usually from the deepest depth). The average duplicate difference was 0.76 µmol/l (0.3%).

BODC Data Processing Procedures

Data received were loaded into the BODC database using established BODC data banking procedures. Any replicates were averaged and standard deviation calculated. Details of mapping between originator's channels and BODC's parameter codes are given below:

Originator's Parameter Unit BODC Parameter Code BODC Unit Comments
bottle oxy µmol/l DOXYWITX µmol/l -
- - SDOXWITX µmol/l Generated by BODC when replicates were averaged

Project Information

Marine LTSS: CLASS (Climate Linked Atlantic Sector Science)

Introduction

CLASS is a five year (2018 to 2023) programme, funded by the Natural Environment Research Council (NERC) and extended until March 2024.

Scientific Rationale

The ocean plays a vital role in sustaining life on planet Earth, providing us with both living resources and climate regulation. The trajectory of anthropogenically driven climate change will be substantially controlled by the ocean due to its absorption of excess heat and carbon from the atmosphere, with consequent impacts on ocean resources that remain poorly understood. In an era of rapid planetary change, expanding global population and intense resource exploitation, it is vital that there are internationally coordinated ocean observing and prediction systems so policy makers can make sound evidence-based decisions about how to manage our interaction with the ocean. CLASS will underpin the UK contribution to these systems, documenting and understanding change in the marine environment, evaluating the impact of climate change and effectiveness of conservation measures and predicting the future evolution of marine environments. Over the five-year period CLASS will enhance the cost-effectiveness of observing systems by migrating them towards cutting edge autonomous technologies and developing new sensors. Finally, CLASS will create effective engagement activities ensuring academic partners have transparent access to NERC marine science capability through graduate training partnerships and access to shipborne, lab based and autonomous facilities, and modelling capabilities.


Data Activity or Cruise Information

Data Activity

Start Date (yyyy-mm-dd) 2018-05-29
End Date (yyyy-mm-dd) Ongoing
Organization Undertaking ActivityNational Oceanography Centre, Southampton
Country of OrganizationUnited Kingdom
Originator's Data Activity IdentifierJC165_CTD_JC165-032
Platform Categorylowered unmanned submersible

BODC Sample Metadata Report for JC165_CTD_JC165-032

Sample reference number Nominal collection volume(l) Bottle rosette position Bottle firing sequence number Minimum pressure sampled (dbar) Maximum pressure sampled (dbar) Depth of sampling point (m) Bottle type Sample quality flag Bottle reference Comments
1314560   10.00 1   4925.90 4926.90 4829.40 Niskin bottle No problem reported    
1314566   10.00 5   4845.60 4846.60 4751.50 Niskin bottle No problem reported    
1314569   10.00 8   4072.80 4073.80 4000.70 Niskin bottle No problem reported    
1314572   10.00 10   3047.20 3048.20 3000.40 Niskin bottle No problem reported    
1314575   10.00 12   2026.50 2027.50 2000.30 Niskin bottle No problem reported    
1314578   10.00 15   1822.80 1823.80 1800.10 Niskin bottle No problem reported    
1314581   10.00 17    859.00  860.00  850.50 Niskin bottle No problem reported    
1314584   10.00 19    631.90  632.90  626.10 Niskin bottle No problem reported    
1314587   10.00 21    251.40  252.40  249.60 Niskin bottle No problem reported    
1314590   10.00 23     34.50   35.50   34.70 Niskin bottle No problem reported    
1363529   10.00 3   4895.40 4896.40 4799.80 Niskin bottle No problem reported    

Please note:the supplied parameters may not have been sampled from all the bottle firings described in the table above. Cross-match the Sample Reference Number above against the SAMPRFNM value in the data file to identify the relevant metadata.

Related Data Activity activities are detailed in Appendix 1

Cruise

Cruise Name JC165
Departure Date 2018-05-19
Arrival Date 2018-06-12
Principal Scientist(s)Henry Ruhl (National Oceanography Centre, Southampton)
Ship RRS James Cook

Complete Cruise Metadata Report is available here


Fixed Station Information


No Fixed Station Information held for the Series


BODC Quality Control Flags

The following single character qualifying flags may be associated with one or more individual parameters with a data cycle:

Flag Description
Blank Unqualified
< Below detection limit
> In excess of quoted value
A Taxonomic flag for affinis (aff.)
B Beginning of CTD Down/Up Cast
C Taxonomic flag for confer (cf.)
D Thermometric depth
E End of CTD Down/Up Cast
G Non-taxonomic biological characteristic uncertainty
H Extrapolated value
I Taxonomic flag for single species (sp.)
K Improbable value - unknown quality control source
L Improbable value - originator's quality control
M Improbable value - BODC quality control
N Null value
O Improbable value - user quality control
P Trace/calm
Q Indeterminate
R Replacement value
S Estimated value
T Interpolated value
U Uncalibrated
W Control value
X Excessive difference

SeaDataNet Quality Control Flags

The following single character qualifying flags may be associated with one or more individual parameters with a data cycle:

Flag Description
0 no quality control
1 good value
2 probably good value
3 probably bad value
4 bad value
5 changed value
6 value below detection
7 value in excess
8 interpolated value
9 missing value
A value phenomenon uncertain
B nominal value
Q value below limit of quantification

Appendix 1: JC165_CTD_JC165-032

Related series for this Data Activity are presented in the table below. Further information can be found by following the appropriate links.

If you are interested in these series, please be aware we offer a multiple file download service. Should your credentials be insufficient for automatic download, the service also offers a referral to our Enquiries Officer who may be able to negotiate access.

Series IdentifierData CategoryStart date/timeStart positionCruise
1929051Water sample data2018-05-29 14:08:0048.00093 N, 16.50327 WRRS James Cook JC165
2115855Water sample data2018-05-29 14:08:0048.00093 N, 16.50327 WRRS James Cook JC165