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Metadata Report for BODC Series Reference Number 1969145


Metadata Summary

Data Description

Data Category Water sample data
Instrument Type
NameCategories
Niskin bottle  discrete water samplers
Plymouth Marine Laboratory automated Winkler titration system  titrators
Instrument Mounting lowered unmanned submersible
Originating Country United Kingdom
Originator Ms Rebecca May
Originating Organization Plymouth Marine Laboratory
Processing Status banked
Online delivery of data Download available - Ocean Data View (ODV) format
Project(s) PML National Capability
 

Data Identifiers

Originator's Identifier DY084_CTD_DOXY_5328:CTD030
BODC Series Reference 1969145
 

Time Co-ordinates(UT)

Start Time (yyyy-mm-dd hh:mm) 2017-10-08 13:21
End Time (yyyy-mm-dd hh:mm) -
Nominal Cycle Interval -
 

Spatial Co-ordinates

Latitude 9.92697 N ( 9° 55.6' N )
Longitude 27.44390 W ( 27° 26.6' W )
Positional Uncertainty 0.1 to 0.5 n.miles
Minimum Sensor or Sampling Depth 5.1 m
Maximum Sensor or Sampling Depth 495.4 m
Minimum Sensor or Sampling Height 4729.0 m
Maximum Sensor or Sampling Height 5219.3 m
Sea Floor Depth 5224.4 m
Sea Floor Depth Source PEVENT
Sensor or Sampling Distribution Unspecified -
Sensor or Sampling Depth Datum Unspecified -
Sea Floor Depth Datum Instantaneous - Depth measured below water line or instantaneous water body surface
 

Parameters

BODC CODERankUnitsTitle
ADEPZZ011MetresDepth (spatial coordinate) relative to water surface in the water body
BOTTFLAG1Not applicableSampling process quality flag (BODC C22)
DOXYWITX1Micromoles per litreConcentration of oxygen {O2 CAS 7782-44-7} per unit volume of the water body [dissolved plus reactive particulate phase] by Winkler titration
FIRSEQID1DimensionlessBottle firing sequence number
ROSPOSID1DimensionlessBottle rosette position identifier
SAMPRFNM1DimensionlessSample reference number

Definition of BOTTFLAG

BOTTFLAGDefinition
0The sampling event occurred without any incident being reported to BODC.
1The filter in an in-situ sampling pump physically ruptured during sample resulting in an unquantifiable loss of sampled material.
2Analytical evidence (e.g. surface water salinity measured on a sample collected at depth) indicates that the water sample has been contaminated by water from depths other than the depths of sampling.
3The feedback indicator on the deck unit reported that the bottle closure command had failed. General Oceanics deck units used on NERC vessels in the 80s and 90s were renowned for reporting misfires when the bottle had been closed. This flag is also suitable for when a trigger command is mistakenly sent to a bottle that has previously been fired.
4During the sampling deployment the bottle was fired in an order other than incrementing rosette position. Indicative of the potential for errors in the assignment of bottle firing depth, especially with General Oceanics rosettes.
5Water was reported to be escaping from the bottle as the rosette was being recovered.
6The bottle seals were observed to be incorrectly seated and the bottle was only part full of water on recovery.
7Either the bottle was found to contain no sample on recovery or there was no bottle fitted to the rosette position fired (but SBE35 record may exist).
8There is reason to doubt the accuracy of the sampling depth associated with the sample.
9The bottle air vent had not been closed prior to deployment giving rise to a risk of sample contamination through leakage.

Definition of Rank

  • Rank 1 is a one-dimensional parameter
  • Rank 2 is a two-dimensional parameter
  • Rank 0 is a one-dimensional parameter describing the second dimension of a two-dimensional parameter (e.g. bin depths for moored ADCP data)

Problem Reports

No Problem Report Found in the Database


Data Access Policy

Open Data supplied by Natural Environment Research Council (NERC)

You must always use the following attribution statement to acknowledge the source of the information: "Contains data supplied by Natural Environment Research Council."


Narrative Documents

Plymouth Marine Laboratory automated Winkler titration system

A custom-made titration system with photometric end-point detection designed by Dr Carol Robinson, Plymouth Marine Laboratory. Measures dissolved oxygen via winkler titration method Measures dissolved oxygen via winkler titration method. Key features include a metrohm Dosimat 765 burette and photometer. Precision: 0.1 umol/kg.

Currently no specifications sheet available.

Niskin Bottle

The Niskin bottle is a device used by oceanographers to collect subsurface seawater samples. It is a plastic bottle with caps and rubber seals at each end and is deployed with the caps held open, allowing free-flushing of the bottle as it moves through the water column.

Standard Niskin

The standard version of the bottle includes a plastic-coated metal spring or elastic cord running through the interior of the bottle that joins the two caps, and the caps are held open against the spring by plastic lanyards. When the bottle reaches the desired depth the lanyards are released by a pressure-actuated switch, command signal or messenger weight and the caps are forced shut and sealed, trapping the seawater sample.

Lever Action Niskin

The Lever Action Niskin Bottle differs from the standard version, in that the caps are held open during deployment by externally mounted stainless steel springs rather than an internal spring or cord. Lever Action Niskins are recommended for applications where a completely clear sample chamber is critical or for use in deep cold water.

Clean Sampling

A modified version of the standard Niskin bottle has been developed for clean sampling. This is teflon-coated and uses a latex cord to close the caps rather than a metal spring. The clean version of the Levered Action Niskin bottle is also teflon-coated and uses epoxy covered springs in place of the stainless steel springs. These bottles are specifically designed to minimise metal contamination when sampling trace metals.

Deployment

Bottles may be deployed singly clamped to a wire or in groups of up to 48 on a rosette. Standard bottles and Lever Action bottles have a capacity between 1.7 and 30 L. Reversing thermometers may be attached to a spring-loaded disk that rotates through 180° on bottle closure.

DY084 (AMT27) Winkler Titration Dissolved Oxygen Concentrations from CTD Bottles

Originator's Protocol for Data Acquisition and Analysis

Seawater samples were collected from each CTD cast deployed during the cruise, with four to fice samples per station and 352 samples collected in total. These samples were subsequently fixed and analysed via titration methods to assess Dissolved Oxygen (DO) concentration. DO was determined by automated Winkler titration with photometric end-point detection (Carritt and Carpenter 1966). The concentration of thiosulphate was calibrated every 3 days using a commercial 0.1N KIO3 standard (Sigma-aldrich, FIXANAL). The pipettes used for dispensing reagents were gravimetrically calibrated prior to the cruise. A traceable thermometer was used for measuring the fixing temperature (VWR TD 121, serial number: 92405158).

Dissolved Oxygen in seawater is produced by photosynthesis and consumed by respiration and photochemical reactions in the surface. Equilibrium between dissolved DO in seawater and the atmosphere is maintained through air-sea gas exchange. DO was measured with a CTD Sea-Bird 43 oxygen sensor mounted on the CTD hydrocast on AMT27. The objective of this work was to calibrate the sensor using discrete samples from Niskin bottles which were analysed by automated Winkler titration.

References Cited

Carritt, D.E. and Carpenter, J.H. 1966. Comparison and evaluation of currently employed modifications of the Winkler method for determining dissolved oxygen in seawater; a NASCO report. J. Marine Res., 24: 286-318.

Instrumentation Description

Plymouth Marine Laboratory automated Winkler titration system.

Further information can be found here.

BODC Data Processing Procedures

Data were submitted to BODC during the cruise in an Excel spreadsheet for calibration of the Sea-Bird 43 oxygen sensor and archived under BODC accession number BOD170193. Sample metadata provided (CTD cast, rosette bottle number, depth and date) were checked against metadata already held in the database. Rosette position and depth were used to match the samples to those in the database. There were no discrepancies. The oxygen concentrations were provided in micromoles per litre so no unit conversions were required to convert to the BODC parameter code applied. The data were reformatted, assigned BODC parameter codes and loaded in BODC's samples database under Oracle Relational Database Management System.

The parameter mapping between originators parameters and BODC parameters is provided below;

Originator's Parameter Unit Description BODC Parameter Code BODC Unit Comments
CTD O2 Micromoles per litre (µmol/l) Concentration of oxygen {O2 CAS 7782-44-7} per unit volume of the water body [dissolved plus reactive particulate phase] by Winkler titration DOXYWITX Micromoles per litre (µmol/l) n/a

Data Quality Report

The data originator supplied flags to accompany each sample (Flag 0=ok, 1=suspect, 999=fail). There were 11 occasions where the titration failed (negative titre volume). These samples were excluded from the final dataset and not ingested into the BODC database. Where samples were identified as suspect, these were due to one of the following reasons: sample affected by bubbles; the vents were left open on the CTD bottles; chipped stoppers possibly affecting sample volume or the temperature took a long time to read. The suspect data were loaded to the database and flagged with an 'L' flag (mprobable value - originator's quality control). The raw data file is available on request. 352 samples were collected during the cruise and of these, 348 data values were provided to BODC. 11 samples were excluded from the final dataset, which consists of 337 samples in total.


Project Information

PML National Capability

The Plymouth Marine Laboratory National Capability focuses on long term science concerned with basin/decadal variability of the Ocean.


Data Activity or Cruise Information

Data Activity

Start Date (yyyy-mm-dd) 2017-10-08
End Date (yyyy-mm-dd) 2017-10-08
Organization Undertaking ActivityPlymouth Marine Laboratory
Country of OrganizationUnited Kingdom
Originator's Data Activity IdentifierDY084_CTD_CTD030
Platform Categorylowered unmanned submersible

No Document Information Held for the Series

Related Data Activity activities are detailed in Appendix 1

Cruise

Cruise Name DY084 (AMT27, DY085)
Departure Date 2017-09-23
Arrival Date 2017-11-05
Principal Scientist(s)Andrew Rees (Plymouth Marine Laboratory), Phyllis Lam (University of Southampton School of Ocean and Earth Science)
Ship RRS Discovery

Complete Cruise Metadata Report is available here


Fixed Station Information


No Fixed Station Information held for the Series


BODC Quality Control Flags

The following single character qualifying flags may be associated with one or more individual parameters with a data cycle:

Flag Description
Blank Unqualified
< Below detection limit
> In excess of quoted value
A Taxonomic flag for affinis (aff.)
B Beginning of CTD Down/Up Cast
C Taxonomic flag for confer (cf.)
D Thermometric depth
E End of CTD Down/Up Cast
G Non-taxonomic biological characteristic uncertainty
H Extrapolated value
I Taxonomic flag for single species (sp.)
K Improbable value - unknown quality control source
L Improbable value - originator's quality control
M Improbable value - BODC quality control
N Null value
O Improbable value - user quality control
P Trace/calm
Q Indeterminate
R Replacement value
S Estimated value
T Interpolated value
U Uncalibrated
W Control value
X Excessive difference

SeaDataNet Quality Control Flags

The following single character qualifying flags may be associated with one or more individual parameters with a data cycle:

Flag Description
0 no quality control
1 good value
2 probably good value
3 probably bad value
4 bad value
5 changed value
6 value below detection
7 value in excess
8 interpolated value
9 missing value
A value phenomenon uncertain
B nominal value
Q value below limit of quantification

Appendix 1: DY084_CTD_CTD030

Related series for this Data Activity are presented in the table below. Further information can be found by following the appropriate links.

If you are interested in these series, please be aware we offer a multiple file download service. Should your credentials be insufficient for automatic download, the service also offers a referral to our Enquiries Officer who may be able to negotiate access.

Series IdentifierData CategoryStart date/timeStart positionCruise
2002991Water sample data2017-10-08 13:21:009.92697 N, 27.4439 WRRS Discovery DY084 (AMT27, DY085)
2006863Water sample data2017-10-08 13:21:009.92697 N, 27.4439 WRRS Discovery DY084 (AMT27, DY085)