Search the data

Metadata Report for BODC Series Reference Number 2108232


Metadata Summary

Data Description

Data Category Water sample data
Instrument Type
NameCategories
Non-toxic sea water supply  continuous water samplers
Instrument Mounting research vessel
Originating Country United Kingdom
Originator Dr Andy Rees
Originating Organization Plymouth Marine Laboratory
Processing Status banked
Online delivery of data Download available - Ocean Data View (ODV) format
Project(s) Oceans 2025 Theme 10 SO1:AMT
 

Data Identifiers

Originator's Identifier JC053_GPUMP_PIGX_200:
BODC Series Reference 2108232
 

Time Co-ordinates(UT)

Start Time (yyyy-mm-dd hh:mm) 2010-10-14 20:00
End Time (yyyy-mm-dd hh:mm) 2010-11-22 21:05
Nominal Cycle Interval -
 

Spatial Co-ordinates

Southernmost Latitude 48.09851 S ( 48° 5.9' S )
Northernmost Latitude 49.17427 N ( 49° 10.5' N )
Westernmost Longitude 56.10631 W ( 56° 6.4' W )
Easternmost Longitude 14.16894 W ( 14° 10.1' W )
Positional Uncertainty 0.05 to 0.1 n.miles
Minimum Sensor or Sampling Depth 5.0 m
Maximum Sensor or Sampling Depth 5.0 m
Minimum Sensor or Sampling Height -
Maximum Sensor or Sampling Height -
Sea Floor Depth -
Sea Floor Depth Source -
Sensor or Sampling Distribution Unspecified -
Sensor or Sampling Depth Datum Unspecified -
Sea Floor Depth Datum Unspecified -
 

Parameters

BODC CODERankUnitsTitle
AADYAA011DaysDate (time from 00:00 01/01/1760 to 00:00 UT on day)
AAFDZZ011DaysTime (time between 00:00 UT and timestamp)
ALATGP011DegreesLatitude north relative to WGS84 by unspecified GPS system
ALONGP011DegreesLongitude east relative to WGS84 by unspecified GPS system
CPHLFLP51Milligrams per cubic metreConcentration of chlorophyll-a {chl-a CAS 479-61-8} per unit volume of the water body [particulate >0.2um phase] by filtration, acetone extraction and fluorometry
CPHLFLSD1Milligrams per cubic metreConcentration standard deviation of chlorophyll-a {chl-a CAS 479-61-8} per unit volume of the water body [particulate >0.2um phase] by filtration, acetone extraction and fluorometry

Definition of Rank

  • Rank 1 is a one-dimensional parameter
  • Rank 2 is a two-dimensional parameter
  • Rank 0 is a one-dimensional parameter describing the second dimension of a two-dimensional parameter (e.g. bin depths for moored ADCP data)

Problem Reports

No Problem Report Found in the Database


Data Access Policy

Open Data supplied by Natural Environment Research Council (NERC)

You must always use the following attribution statement to acknowledge the source of the information: "Contains data supplied by Natural Environment Research Council."


Narrative Documents

Non-toxic (underway) sea water supply

A source of uncontaminated near-surface (commonly 3 to 7 m) seawater pumped continuously to shipboard laboratories on research vessels. There is typically a temperature sensor near the intake (known as the hull temperature) to provide measurements that are as close as possible to the ambient water temperature. The flow from the supply is typically directed through continuously logged sensors such as a thermosalinograph and a fluorometer. Water samples are often collected from the non-toxic supply. The system is also referred to as the underway supply.

Extracted chlorophyll-a measurements from non-toxic underway supply samples collected during AMT20 (JC053)

Originator's Protocol for Data Acquisition and Analysis

Samples were taken from the non-toxic underway supply to provide a calibration for the continuous fluorometer measurements. During the cruise 154 samples were collected from the non-toxic underway system and processed for extracted chl-a measurement. The majority of noon samples had three replicate volumes sampled.

250 ml samples of seawater collected from the non-toxic supply were filtered through 0.2 µm polycarbonate filters. The chlorophyl-a was then extracted from the filters with 10ml 90% acetone for at least 12 hours while samples were stored in a freezer. The concentrations were then determined fluorometrically.

References Cited

Instrumentation Description

Turner Designs Trilogy fluorometer with a non-acidified chl module (CHL NA #046) fitted

BODC Data Processing Procedures

Data were submitted on the Post-Cruise Archive and archived under BODC's accession number RVS100284. Sample metadata (date, time (UT), latitude and longitude) were provided and loaded to the database.

No unit conversion was necessary as the units the data were supplied in the files matched the units for the parameter codes in the BODC Parameter Dictionary. Where more than one data point was provided for a sample the mean and standard deviation were calculated and loaded to the database.

A parameter mapping table is provided below;

Originator's Parameter Units Description BODC Parameter Code Units Comments
Chl-a mean µg l-1 Concentration of chlorophyll-a {chl-a} per unit volume of the water body [particulate >0.2um phase] by filtration, acetone extraction and fluorometry CPHLFLP5 mg m-3 n/a
Chl-a stdev µg l-1 Concentration standard deviation of chlorophyll-a {chl-a} per unit volume of the water body [particulate >0.2um phase] by filtration, acetone extraction and fluorometry CPHLFLSD mg m-3 n/a

Data Quality Report

BODC were advised by the data originator there were two samples returning values considered too low. The suspect values indicated by the data originator have been flagged 'L'. No additional data values were flagged by BODC.

Problem Report

Not relevant to this data set.


Project Information

Oceans 2025 Theme 10, Sustained Observation Activity 1: The Atlantic Meridional Transect (AMT)

The Atlantic Meridional Transect has been operational since 1995 and through the Oceans 2025 programme secures funding for a further five cruises during the period 2007-2012. The AMT programme began in 1995 utilising the passage of the RRS James Clark Ross between the UK and the Falkland Islands southwards in September and northwards in April each year. Prior to Oceans 2025 the AMT programme has completed 18 cruises following this transect in the Atlantic Ocean. This sustained observing system aims to provide basin-scale understanding of the distribution of planktonic communities, their nutrient turnover and biogenic export in the context of hydrographic and biogeochemical provinces of the North and South Atlantic Oceans.

The Atlantic Meridional Transect Programme is an open ocean in situ observing system that will:

  • give early warning of any fundamental change in Atlantic ecosystem functionng
  • improve forecasts of the future ocean state and associated socio-economic impacts
  • provide a "contextual" logistical and scientific infrastructure for independently-funded national and international open ocean biogeochemical and ecological research.

The specific objectives are:

  • To collect hydrographic, chemical, ecological and optical data on transects between the UK and the Falkland Islands
  • To quantify the nature and causes of ecological and biogeochemical variability in planktonic ecosystems
  • To assess the effects of variability in planktonic ecosystems on biogenic export and on air-sea exchange of radiatively active gases

The measurements taken and experiments carried out on the AMT cruises will be closely linked to Themes 2 and 5. The planned cruise track also allows for the AMT data to be used in providing spatial context to the Sustained Observation Activities at the Porcupine Abyssal Plain Ocean Observatory (SO2) and the Western Channel Observatory (SO10).

More detailed information on this Work Package is available at pages 6 - 9 of the official Oceans 2025 Theme 10 document: Oceans 2025 Theme 10

Weblink: http://www.oceans2025.org/


Data Activity or Cruise Information

Cruise

Cruise Name JC053 (AMT20)
Departure Date 2010-10-12
Arrival Date 2010-11-25
Principal Scientist(s)Andrew Rees (Plymouth Marine Laboratory)
Ship RRS James Cook

Complete Cruise Metadata Report is available here


Fixed Station Information


No Fixed Station Information held for the Series


BODC Quality Control Flags

The following single character qualifying flags may be associated with one or more individual parameters with a data cycle:

Flag Description
Blank Unqualified
< Below detection limit
> In excess of quoted value
A Taxonomic flag for affinis (aff.)
B Beginning of CTD Down/Up Cast
C Taxonomic flag for confer (cf.)
D Thermometric depth
E End of CTD Down/Up Cast
G Non-taxonomic biological characteristic uncertainty
H Extrapolated value
I Taxonomic flag for single species (sp.)
K Improbable value - unknown quality control source
L Improbable value - originator's quality control
M Improbable value - BODC quality control
N Null value
O Improbable value - user quality control
P Trace/calm
Q Indeterminate
R Replacement value
S Estimated value
T Interpolated value
U Uncalibrated
W Control value
X Excessive difference

SeaDataNet Quality Control Flags

The following single character qualifying flags may be associated with one or more individual parameters with a data cycle:

Flag Description
0 no quality control
1 good value
2 probably good value
3 probably bad value
4 bad value
5 changed value
6 value below detection
7 value in excess
8 interpolated value
9 missing value
A value phenomenon uncertain
B nominal value
Q value below limit of quantification