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A study of adaptive radiation in an intertidal marine isopod in the North Atlantic, 2015-2016

Data set information

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General  
Data holding centreBritish Oceanographic Data Centre
CountryUnited Kingdom  United Kingdom
Time period2015/16
OngoingNo
Geographical area

Samples were collected from intertidal locations across the UK and in Maine and Massachusetts (USA)

Observations 
Parameters

Molecular biology parameters

Instruments

Autoanalysers

Description 
Summary

This dataset consists of the results of the genetic comparison of different species of the genus Jaera, a marine isopod, in the UK and USA. Jaera albifrons, J. forsmani, J. ischiosetosa, J. nordmanni and J. praehirsuta were collected from the underside of rocks at intertidal sites in the the UK. In the USA, J. posthirsuta, J. albifrons, J. ischiosetosa were similarly collected from sites in Maine and Massachusetts. Sample collection took place in 2015 and 2016. Sbf1 gene Restriction site Associated DNA (RAD) libraries were generated from total DNA using Illumina paired end DNA sequencing. In addition, individual microbiomes were characterised for Jaera albifrons, J. ischiosetosa, J. nordmanni, J. posthirsuta from UK populations using 16S rDNA metabarcode amplicon sequencing. The project aimed to assess parallel signatures of evolution across isolated populations and pinpoint regions of elevated genetic differentiation. All sampling and sequencing pipelines were undertaken by Marius Wenzel and Stuart Piertney (University of Aberdeen), with funding from NERC solo grant NE/M015661/1. Data are archived at the National Center for Biotechnology Information (NCBI).

OriginatorsUniversity of Aberdeen, School of Biological Sciences
Data web sitehttps://www.ncbi.nlm.nih.gov/bioproject/433614
Availability 
OrganisationBritish Oceanographic Data Centre
AvailabilityUnrestricted
ContactPolly Hadžiabdić (Head of the BODC Requests Team)
Address

British Oceanographic Data Centre
Joseph Proudman Building 6 Brownlow Street
Liverpool
Merseyside
L3 5DA
United Kingdom

Emailenquiries@bodc.ac.uk
Administration 
Collating centreBritish Oceanographic Data Centre
Local identifier1048_NE_M015661_1
Global identifier7076
Last revised2020-10-28