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Metadata Report for BODC Series Reference Number 1118290


Metadata Summary

Data Description

Data Category Surface temp/sal
Instrument Type
NameCategories
WET Labs {Sea-Bird WETLabs} WETStar fluorometer  fluorometers
WET Labs {Sea-Bird WETLabs} C-Star transmissometer  transmissometers
Sea-Bird SBE 45 MicroTSG thermosalinograph  thermosalinographs; water temperature sensor; salinity sensor
Sea-Bird SBE 38 thermometer  water temperature sensor
Instrument Mounting research vessel
Originating Country United Kingdom
Originator Prof Stuart Cunningham
Originating Organization National Oceanography Centre, Southampton
Processing Status banked
Online delivery of data Download available - Ocean Data View (ODV) format
Project(s) RAPIDMOC
RAPID-WATCH
 

Data Identifiers

Originator's Identifier D344_PRODQXF_SURF
BODC Series Reference 1118290
 

Time Co-ordinates(UT)

Start Time (yyyy-mm-dd hh:mm) 2009-10-21 00:00
End Time (yyyy-mm-dd hh:mm) 2009-11-18 13:30
Nominal Cycle Interval 30.0 seconds
 

Spatial Co-ordinates

Southernmost Latitude 23.71317 N ( 23° 42.8' N )
Northernmost Latitude 28.53817 N ( 28° 32.3' N )
Westernmost Longitude 78.78817 W ( 78° 47.3' W )
Easternmost Longitude 13.33200 W ( 13° 19.9' W )
Positional Uncertainty 0.0 to 0.01 n.miles
Minimum Sensor or Sampling Depth 5.0 m
Maximum Sensor or Sampling Depth 5.0 m
Minimum Sensor or Sampling Height -
Maximum Sensor or Sampling Height -
Sea Floor Depth -
Sea Floor Depth Source -
Sensor or Sampling Distribution Fixed common depth - All sensors are grouped effectively at the same depth which is effectively fixed for the duration of the series
Sensor or Sampling Depth Datum Approximate - Depth is only approximate
Sea Floor Depth Datum -
 

Parameters

BODC CODERankUnitsTitle
AADYAA011DaysDate (time from 00:00 01/01/1760 to 00:00 UT on day)
AAFDZZ011DaysTime (time between 00:00 UT and timestamp)
ALATTR011DegreesLatitude north relative to WGS84 by Trimble GPS
ALONTR011DegreesLongitude east relative to WGS84 by Trimble GPS
ATTNUN251per metreAttenuation (unspecified wavelength) per unit length of the water body by 25cm path length transmissometer
CPHLPM011Milligrams per cubic metreConcentration of chlorophyll-a {chl-a CAS 479-61-8} per unit volume of the water body [particulate >unknown phase] by in-situ chlorophyll fluorometer and manufacturer's calibration applied
FVLTWS011VoltsRaw signal (voltage) of instrument output by linear-response chlorophyll fluorometer
PSALSG011DimensionlessPractical salinity of the water body by thermosalinograph and computation using UNESCO 1983 algorithm and calibration against independent measurements
TEMPHG011Degrees CelsiusTemperature of the water body by thermosalinograph hull sensor and verification against independent measurements

Definition of Rank

  • Rank 1 is a one-dimensional parameter
  • Rank 2 is a two-dimensional parameter
  • Rank 0 is a one-dimensional parameter describing the second dimension of a two-dimensional parameter (e.g. bin depths for moored ADCP data)

Problem Reports

Transmittance

The attenuation data is of poor quality and the entire dataset has been flagged. Approximately 80% of the dataset consists of heavy spiking and is most likely due to passing bubbles.

RRS Discovery D344 Surface Hydrography Quality Control Report

Fluorescence

The fluorescence channels look good. There is spiking and dropouts observed at the begining and at the end of the dataset. In addition, there is a very small amount of unrealistic data values observed at various points within the dataset that have been flagged. Otherwise, the quality of flourescence data is very good.

Sea surface temperature and salinity

The sea surface temperature and salinity channels look good. Both channels exhibit dropouts at the beginning and the end of the channels. An additional two dropouts also present at the same times in both channels. This is likely due to sensor malfunction and all dropouts have been flagged as null.


Data Access Policy

Open Data supplied by Natural Environment Research Council (NERC)

You must always use the following attribution statement to acknowledge the source of the information: "Contains data supplied by Natural Environment Research Council."


Narrative Documents

SeaBird Digital Oceanographic Thermometer SBE38

The SBE38 is an ultra-stable thermistor that can be integrated as a remote temperature sensor with an SBE21 Thermosalinograph or an SBE 45 Micro TSG, or as a secondary temperature sensor with an SBE 16 plus, 16plus-IM, 16plus V2, 16plus-IM V2 or 19plus V2 SEACAT CTD.

Temperature is determined by applying an AC excitation to reference resistances and an ultra-stable aged thermistor. The reference resistor is a hermetically sealed VISHAY. AC excitation and ratiometric comparison using a common processing channel removes measurement errors due to parasitic thermocouples, offset voltages, leakage currents and gain errors.

The SBE38 can operate in polled sampling, where it takes one sample and transmits the data, or in continuous sampling.

Specifications

Depth rating up to 10500 m
Temperature range -5 to 35°C
Initial accuracy ± 0.001°C
Resolution 0.00025°C
Stability 0.001°C in 6 months
Response time 500 ms
Self-heating error < 200 µK

Further details can be found in the manufacturer's specification sheet.

WET Labs WETStar Fluorometers

WET Labs WETStar fluorometers are miniature flow-through fluorometers, designed to measure relative concentrations of chlorophyll, CDOM, uranine, rhodamineWT dye, or phycoerythrin pigment in a sample of water. The sample is pumped through a quartz tube, and excited by a light source tuned to the fluorescence characteristics of the object substance. A photodiode detector measures the portion of the excitation energy that is emitted as fluorescence.

Specifications

By model:

  Chlorophyll WETStar CDOM WETStar Uranine WETStar Rhodamine WETStar Phycoerythrin WETStar
Excitation wavelength 460 nm 370 nm 485 nm 470 nm 525 nm
Emission wavelength 695 nm 460 nm 530 nm 590 nm 575 nm
Sensitivity 0.03 µg l-1 0.100 ppb QSD 1 µg l-1 - -
Range 0.03-75 µg l-1 0-100 ppb; 0-250 ppb 0-4000 µg l-1 - -

All models:

Temperature range 0-30°C
Depth rating 600 m
Response time 0.17 s analogue; 0.125 s digital
Output 0-5 VDC analogue; 0-4095 counts digital

Further details can be found in the manufacturer's specification sheet, and in the instrument manual.

WETLabs C-Star transmissometer

This instrument is designed to measure beam transmittance by submersion or with an optional flow tube for pumped applications. It can be used in profiles, moorings or as part of an underway system.

Two models are available, a 25 cm pathlength, which can be built in aluminum or co-polymer, and a 10 cm pathlength with a plastic housing. Both have an analog output, but a digital model is also available.

This instrument has been updated to provide a high resolution RS232 data output, while maintaining the same design and characteristics.

Specifications

Pathlength 10 or 25 cm
Wavelength 370, 470, 530 or 660 nm
Bandwidth

~ 20 nm for wavelengths of 470, 530 and 660 nm

~ 10 to 12 nm for a wavelength of 370 nm

Temperature error 0.02 % full scale °C-1
Temperature range 0 to 30°C
Rated depth

600 m (plastic housing)

6000 m (aluminum housing)

Further details are available in the manufacturer's specification sheet or user guide.

RRS Discovery D344 Surface Hydrography Instrumentation

Instrumentation

Sensor Serial number Last calibration date
SeaBird SBE 45 MicroTSG 0229 25/02/2009
SeaBird SBE 38 digital thermometer 3853440-0476 01/01/2009
Wetlabs C-star transmissometer CST-113R 30/04/2009
Wetlabs fluorometer WS3S-117 11/06/2009

Near surface temperature was measured with a SBE 38 probe, located in the forward hold on the starboard side, measuring the temperature of water 6-7 metres below the surface. The seawater intake projects about 0.5 metres below the hull.

A SBE45 MicroTSG is fitted in the wet lab and the non-toxic supply runs from this intake. Samples were taken from the non-toxic supply on the upstream side of the SBE 45 in order to calibrate the conductivity data.

SeaBird MicroTSG Thermosalinograph SBE 45

The SBE45 MicroTSG is an externally powered instrument designed for shipboard measurement of temperature and conductivity of pumped near-surface water samples. The instrument can also compute salinity and sound velocity internally.

The MicroTSG comprises a platinum-electrode glass conductivity cell and a stable, pressure-protected thermistor temperature sensor. It also contains an RS-232 port for appending the output of a remote temperature sensor, allowing for direct measurement of sea surface temperature.

The instrument can operate in Polled, Autonomous and Serial Line Sync sampling modes:

  • Polled sampling: the instrument takes one sample on command
  • Autonomous sampling: the instrument samples at preprogrammed intervals and does not enter quiescence (sleep) state between samples
  • Serial Line Sync: a pulse on the serial line causes the instrument to wake up, sample and re-enter quiescent state automatically

Specifications

  Conductivity Temperature Salinity
Range 0 to 7 Sm-1 -5 to 35°C  
Initial accuracy 0.0003 Sm-1 0.002°C 0.005 (typical)
Resolution 0.00001 Sm-1 0.0001°C 0.0002 (typical)
Typical stability (per month) 0.0003 Sm-1 0.0002°C 0.003 (typical)

Further details can be found in the manufacturer's specification sheet.

RRS Discovery D344 Surface Hydrography Data Processing Procedures

Originator's Data Processing

Data were taken from the ship's TECHSAS streams and formatted into MSTAR netCDF format and were provided to BODC for processing. All times were defined as seconds from 00:00:00 01/01/2009.

Files delivered to BODC

Filename Content description Format Interval Start date/time (UTC) End date/time (UTC) Comments
met_tsg_di344_01.nc Fluorescence and transmittance NetCDF 2 sec. 18-Oct-2009 00:00:01 18-Nov-2009 13:30:36  
tsg_di344_01_cal.nc Housing Temperature, remote temperature, salinity and conductivity NetCDF 1 sec. 21-Oct-2009 18:13:20 17-Nov-2009 16:08:19  

BODC Data Processing

The files were reformatted to BODC internal format using standard data banking procedures. All files were averaged to 60 second intervals. The following table shows how the variables within the files were mapped to appropriate BODC parameter codes:

met_tsg_di344_01.nc

Originator's variable Originator's units Description BODC Code BODC Units Unit conversion Comments
trans V Raw voltage measured by transmissometer TVLTDZ01 volts none  
fluo volt Raw voltage measured by fluorometer FVLTWS01 volt none  

tsg_di344_01_cal.nc

Originator's variable Originator's units Description BODC Code BODC Units Unit conversion Comments
salin pss-78 TSG salinity PSALSG01 dimensionless none  
temp_h degrees_celcius Housing water temperature TMESSG01 degrees celcius none  
cond S/m Conductivity CNDCSG01 S/m none  
temp_r degrees_celcius Remote water temperature TEMPHG01 degrees celcius none  

All the reformatted data were visualised using the in-house EDSERPLO software. Suspect data were marked by adding an appropriate quality control flag.

Calibration

Temperature

The hull temperature data were calibrated at BODC using CTD temperature data. Note, the CTD measurements have not been verified against an independent source. The offset (Underway temperature - CTD temperature) was examined to see if it varied with time or temperature. outliers, with high standard deviations, were identified and discarded. No significant correlation was established between offset and CTD temperature or time. Therefore the data correction is in the form of a mean offset (n=22, standard deviation = 0.01255):

Calibrated underway temperature = underway temperature - 0.00232

Field Calibrations

Salinity data were calibrated by calibrating the conductivity channel and then deriving salinity. Discrete bottle conductivities were compared with the TSG conductivities. A linear fit was applied to the data of the form

cond_corr = 2.4543 x 10-9 t - 0.07596

Where t is time in seconds. The resulting residuals have zero mean with standard deviation of 0.0028 S/m.

Manufacturers Calibrations

Transmissometer

Raw transmissometer data were converted to beam attenuance using the formulae:

c = -1/0.25 x ln(Tr)

where

Tr = (Vsig-0.061)/(4.717-0.061)

Fluorometer

Fluorescence data were converted from raw voltages using the formulae:

CHL (µg/l) = 15.3 x (Output - 0.081)


Project Information

Monitoring the Meridional Overturning Circulation at 26.5N (RAPIDMOC)

Scientific Rationale

There is a northward transport of heat throughout the Atlantic, reaching a maximum of 1.3PW (25% of the global heat flux) around 24.5°N. The heat transport is a balance of the northward flux of a warm Gulf Stream, and a southward flux of cooler thermocline and cold North Atlantic Deep Water that is known as the meridional overturning circulation (MOC). As a consequence of the MOC northwest Europe enjoys a mild climate for its latitude: however abrupt rearrangement of the Atlantic Circulation has been shown in climate models and in palaeoclimate records to be responsible for a cooling of European climate of between 5-10°C. A principal objective of the RAPID programme is the development of a pre-operational prototype system that will continuously observe the strength and structure of the MOC. An initiative has been formed to fulfill this objective and consists of three interlinked projects:

  • A mooring array spanning the Atlantic at 26.5°N to measure the southward branch of the MOC (Hirschi et al., 2003 and Baehr et al., 2004).
  • Additional moorings deployed in the western boundary along 26.5°N (by Prof. Bill Johns, University of Miami) to resolve transport in the Deep Western Boundary Current (Bryden et al., 2005). These moorings allow surface-to-bottom density profiles along the western boundary, Mid-Atlantic Ridge, and eastern boundary to be observed. As a result, the transatlantic pressure gradient can be continuously measured.
  • Monitoring of the northward branch of the MOC using submarine telephone cables in the Florida Straits (Baringer et al., 2001) led by Dr Molly Baringer (NOAA/AOML/PHOD).

The entire monitoring array system created by the three projects will be recovered and redeployed annually until 2008 under RAPID funding. From 2008 until 2014 the array will continue to be serviced annually under RAPID-WATCH funding.

The array will be focussed on three regions, the Eastern Boundary (EB), the Mid Atlantic Ridge (MAR) and the Western Boundary (WB). The geographical extent of these regions are as follows:

  • Eastern Boundary (EB) array defined as a box with the south-east corner at 23.5°N, 25.5°W and the north-west corner at 29.0°N, 12.0°W
  • Mid Atlantic Ridge (MAR) array defined as a box with the south-east corner at 23.0°N, 52.1°W and the north-west corner at 26.5°N, 40.0°W
  • Western Boundary (WB) array defined as a box with the south-east corner at 26.0°N, 77.5°W and the north-west corner at 27.5°N, 69.5°W

References

Baehr, J., Hirschi, J., Beismann, J.O. and Marotzke, J. (2004) Monitoring the meridional overturning circulation in the North Atlantic: A model-based array design study. Journal of Marine Research, Volume 62, No 3, pp 283-312.

Baringer, M.O'N. and Larsen, J.C. (2001) Sixteen years of Florida Current transport at 27N Geophysical Research Letters, Volume 28, No 16, pp3179-3182

Bryden, H.L., Johns, W.E. and Saunders, P.M. (2005) Deep Western Boundary Current East of Abaco: Mean structure and transport. Journal of Marine Research, Volume 63, No 1, pp 35-57.

Hirschi, J., Baehr, J., Marotzke J., Stark J., Cunningham S.A. and Beismann J.O. (2003) A monitoring design for the Atlantic meridional overturning circulation. Geophysical Research Letters, Volume 30, No 7, article number 1413 (DOI 10.1029/2002GL016776)


RAPID- Will the Atlantic Thermohaline Circulation Halt? (RAPID-WATCH)

RAPID-WATCH (2007-2014) is a continuation programme of the Natural Environment Research Council's (NERC) Rapid Climate Change (RAPID) programme. It aims to deliver a robust and scientifically credible assessment of the risk to the climate of UK and Europe arising from a rapid change in the Atlantic Meridional Overturning Circulation (MOC). The programme will also assess the need for a long-term observing system that could detect major MOC changes, narrow uncertainty in projections of future change, and possibly be the start of an 'early warning' prediction system.

The effort to design a system to continuously monitor the strength and structure of the North Atlantic MOC is being matched by comparative funding from the US National Science Foundation (NSF) for the existing collaborations started during RAPID for the observational arrays.

Scientific Objectives

  • To deliver a decade-long time series (2004-2014) of calibrated and quality-controlled measurements of the Atlantic MOC from the RAPID-WATCH arrays.
  • To exploit the data from the RAPID-WATCH arrays and elsewhere to determine and interpret recent changes in the Atlantic MOC, assess the risk of rapid climate change, and investigate the potential for predictions of the MOC and its impacts on climate.

This work will be carried out in collaboration with the Hadley Centre in the UK and through international partnerships.

Mooring Arrays

The RAPID-WATCH arrays are the existing 26°N MOC observing system array (RAPIDMOC) and the WAVE array that monitors the Deep Western Boundary Current. The data from these arrays will work towards meeting the first scientific objective.

The RAPIDMOC array consists of moorings focused in three geographical regions (sub-arrays) along 26.5° N: Eastern Boundary, Mid-Atlantic Ridge and Western Boundary. The Western Boundary sub-array has moorings managed by both the UK and US scientists. The other sub-arrays are solely led by the UK scientists. The lead PI is Dr Stuart Cunningham of the National Oceanography Centre, Southampton, UK.

The WAVE array consists of one line of moorings off Halifax, Nova Scotia. The line will be serviced in partnership with the Bedford Institute of Oceanography (BIO), Halifax, Canada. The lead PI is Dr Chris Hughes of the Proudman Oceanographic Laboratory, Liverpool, UK.

All arrays will be serviced (recovered and redeployed) either on an annual or biennial basis using Research Vessels from the UK, US and Canada.

Modelling Projects

The second scientific objective will be addressed through numerical modelling studies designed to answer four questions:

  • How can we exploit data from the RAPID-WATCH arrays to obtain estimates of the MOC and related variables?
  • What do the observations from the RAPID-WATCH arrays and other sources tell us about the nature and causes of recent changes in the Atlantic Ocean?
  • What are the implications of RAPID-WATCH array data and other recent observations for estimates of the risk due to rapid change in the MOC?
  • Could we use RAPID-WATCH and other observations to help predict future changes in the MOC and climate?

Data Activity or Cruise Information

Cruise

Cruise Name D344
Departure Date 2009-10-21
Arrival Date 2009-11-18
Principal Scientist(s)Stuart A Cunningham (National Oceanography Centre, Southampton)
Ship RRS Discovery

Complete Cruise Metadata Report is available here


Fixed Station Information


No Fixed Station Information held for the Series


BODC Quality Control Flags

The following single character qualifying flags may be associated with one or more individual parameters with a data cycle:

Flag Description
Blank Unqualified
< Below detection limit
> In excess of quoted value
A Taxonomic flag for affinis (aff.)
B Beginning of CTD Down/Up Cast
C Taxonomic flag for confer (cf.)
D Thermometric depth
E End of CTD Down/Up Cast
G Non-taxonomic biological characteristic uncertainty
H Extrapolated value
I Taxonomic flag for single species (sp.)
K Improbable value - unknown quality control source
L Improbable value - originator's quality control
M Improbable value - BODC quality control
N Null value
O Improbable value - user quality control
P Trace/calm
Q Indeterminate
R Replacement value
S Estimated value
T Interpolated value
U Uncalibrated
W Control value
X Excessive difference

SeaDataNet Quality Control Flags

The following single character qualifying flags may be associated with one or more individual parameters with a data cycle:

Flag Description
0 no quality control
1 good value
2 probably good value
3 probably bad value
4 bad value
5 changed value
6 value below detection
7 value in excess
8 interpolated value
9 missing value
A value phenomenon uncertain
B nominal value
Q value below limit of quantification