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Metadata Report for BODC Series Reference Number 1358036


Metadata Summary

Data Description

Data Category Hydrography time series at depth
Instrument Type
NameCategories
Sea-Bird SBE 16plus SEACAT C-T Recorder  water temperature sensor; salinity sensor
Instrument Mounting subsurface mooring
Originating Country United Kingdom
Originator Dr Jo Hopkins
Originating Organization National Oceanography Centre, Liverpool
Processing Status banked
Online delivery of data Download available - Ocean Data View (ODV) format
Project(s) FASTNEt
 

Data Identifiers

Originator's Identifier SG#20130629/SBE5309
BODC Series Reference 1358036
 

Time Co-ordinates(UT)

Start Time (yyyy-mm-dd hh:mm) 2013-07-04 12:32
End Time (yyyy-mm-dd hh:mm) 2013-07-19 17:39
Nominal Cycle Interval 120.0 seconds
 

Spatial Co-ordinates

Latitude 55.79640 N ( 55° 47.8' N )
Longitude 8.60758 W ( 8° 36.5' W )
Positional Uncertainty 0.0 to 0.01 n.miles
Minimum Sensor or Sampling Depth 115.13 m
Maximum Sensor or Sampling Depth 115.13 m
Minimum Sensor or Sampling Height 2.1 m
Maximum Sensor or Sampling Height 2.1 m
Sea Floor Depth 117.23 m
Sea Floor Depth Source DATAHEAD
Sensor or Sampling Distribution Fixed common depth - All sensors are grouped effectively at the same depth which is effectively fixed for the duration of the series
Sensor or Sampling Depth Datum Instantaneous - Depth measured below water line or instantaneous water body surface
Sea Floor Depth Datum Instantaneous - Depth measured below water line or instantaneous water body surface
 

Parameters

BODC CODERankUnitsTitle
AADYAA011DaysDate (time from 00:00 01/01/1760 to 00:00 UT on day)
AAFDZZ011DaysTime (time between 00:00 UT and timestamp)
ACYCAA011DimensionlessSequence number
CNDCPR011Siemens per metreElectrical conductivity of the water body by in-situ conductivity cell
PREXPS011DecibarsPressure (measured variable) exerted by the water body by fixed in-situ pressure sensor and corrected to read zero at sea level
PSALPR011DimensionlessPractical salinity of the water body by conductivity cell and computation using UNESCO 1983 algorithm
TEMPPR011Degrees CelsiusTemperature of the water body

Definition of Rank

  • Rank 1 is a one-dimensional parameter
  • Rank 2 is a two-dimensional parameter
  • Rank 0 is a one-dimensional parameter describing the second dimension of a two-dimensional parameter (e.g. bin depths for moored ADCP data)

Problem Reports

No Problem Report Found in the Database


Data Access Policy

Open Data supplied by Natural Environment Research Council (NERC)

You must always use the following attribution statement to acknowledge the source of the information: "Contains data supplied by Natural Environment Research Council."


Narrative Documents

Sea-Bird SBE 16plus SEACAT

The SBE 16plus is a high accuracy conductivity and temperature recorder (pressure optional). It is designed for moorings and other long-duration, fixed-site deployments. The SBE 16plus has 6 amplified A/D input channels and conditioned power of 500 ma is avaliable for auxiliary sensors, dissolved oxygen, turbidity, fluorescence, PAR etc.

The SBE 16plus is available with a choice of RS-232 or RS-485 interface.

Sensor specifications

  Temperature
(°C)
Conductivity (S m-1) Optional Pressure - strain Gauge Optional Pressure - Quartz
Measurement Range -5 to +35 0 to 9 0 to full scale range: 20 / 100 / 350 / 1000 / 1600 / 2000 / 3500 / 7000 metres 0 to full scale range: 20 / 60 / 130 / 200 / 270 / 680 / 1400 / 2000 / 4200 / 7000 / 10500 metres
Initial accuracy 0.005 0.0005 0.1% (RS-232)/0.04% (RS-485) of full scale range 0.02% (RS-232)/0.002% (RS-485) of full scale range
Typical Stability 0.0002 0.0003 0.05% (RS-232)/0.1% (RS-485) of full scale range 0.025% of full scale range
Resolution 0.0001 0.00005 typical 0.002% of full scale range Depends on sample integration, 0.0006% of full scale range for 1 s integration
Sensor Calibration +1 to +32 0 to 9; physical calibration over range 2.6 to 6.5 S m-1 plus zero conductivity (air) Ambient pressure to full scale range in 5 steps Ambient pressure to full scale range in 5 steps

General information

Memory 8 MB FLASH memory (RS-232); 64 MB FLASH memory (RS-485)
Data Storage Converted temperature and conductivity: 6 bytes per sample. Time: 4 bytes per sample. Pressure (optional): 5 bytes per sample
Real-Time Clock Watch-crystal type 32,768 Hz; accuracy (±1 minutes/year)
Standard Internal Batteries 9 alkaline D-cells. Provides sufficient capacity for 145,000 samples for a CTD and 5M pump
Housing Titanium pressure case rated at 7000 metres
Weight (without pressure) In water: 8.6 kg/In air: 13.7 kg

Further information can be found in the instrument manual

Originators Processing RRS James Cook JC088 Site SE and SG SBE 16 plus Mooring data

Sampling Strategy

RRS James Cook cruise JC088 was the second of two cruises funded by the NERC 'Fluxes Across the Sloping Topography of the North East Atlantic (FASTNEt)' Consortium. JC088 was a 26 day cruise sailing on 28 June 2013 from King George V Dock, Govan to the Malin Shelf edge where in-line and bed frame mooring were deployed before returning to Southampton on 24 July 2013.

Data Processing

Two SBE 16 plus SEACAT recorder instruments were deployed at short term in-line moorings SE and SG.

The Originator supplied a full record of calibrated temperature, conductivity and date/time for each file supplied.

Prior to submission to BODC, the data from the instruments were converted to physical units and collated into a single matrix.

Calibrations

The Originator states it was not possible to remove all the smaller scale instances of thermal instability and therefore has been left to the end user to make any further corrections (or removal of data) that are appropriate for the type of analysis they wish to perform.

The Originator has created gridded data sets of temperature and pressure from the chains of Starmon Miniloggers, MicroCATs and SBE 16 plus SEACAT recorder for moorings SE and SG. These gridded data sets have been linearly interpolated onto a one minute grid. As the SEACAT instruments recorded conductivity, salinity could be derived. To account for the difference in spatial resolution of temperature and salinity measurements, the Originator interpolated salinity data onto the temperature chain depth grid using the relationship of temperature and salinity over time. To remove small-scale discrepancies of the interpolated salinity data a low pass Butterworth filter was applied in vertical space (4 instruments, 3rd order).

The gridded data have not been processed by BODC but are available upon request.

Processing by BODC of RRS James Cook JC088 Site SE and SG SBE 16 plus Mooring data

Data from two SBE 16 plus SEACAT sensors arrived in two Matlab files. The data were reformatted to BODC's internal NetCDF format and the following table shows how the variables within the files were mapped to appropriate BODC parameter codes:

Originator's Variable Units Description BODC Parameter Code Units
Temperature °C Temperature of the water body TEMPPR01 °C
Pressure db Pressure (measured variable) exerted by the water body by fixed in-situ pressure sensor and corrected to read zero at sea level PREXPS01 db
Conductivity S m-1 Electrical conductivity of the water body by in-situ conductivity cell CNDCPR01 S m-1
Salinity dimensionless Practical salinity of the water body by conductivity cell and computation using UNESCO 1983 algorithm PSALPR01 dimensionless

The reformatted data were visualised using BODC's in-house visualisation software. Suspect data were marked by adding an appropriate quality control flag, missing data by setting the data to an appropriate value and setting the quality control flag. The data files have been modified to remove data points that were gathered when the instruments were being deployed and recovered. These data points were deemed unstable by the Originator.


Project Information

Fluxes Across Sloping Topography of the North East Atlantic (FASTNEt)

Background

The FASTNEt consortium was funded to deliver NERC's Ocean Shelf Edge Exchange Programme. Commencing in October 2011, this four year study aims to couple established observational techniques, such as moorings and CTDs, with the very latest in autonomous sampling initiatives - including use of Autosub Long Range and gliders. With the aid of novel model techniques, these observations will be utilised to construct a new paradigm of Ocean/Shelf exchange.

Shelf edge regions mark the gateway between the world's deep oceans and shallower coastal seas, linking terrestrial, atmospheric and oceanic carbon pools and influencing biogeochemical fluxes. Shelf edge processes can influence near-shore productivity (and fisheries) and ultimately affect global climate.

FASTNEt brings together researchers from multiple UK organisations. Further collaboration has been established with five Project Partners: the UK Met Office, Marine Scotland Science, Agri-Food and Biosciences Institute, Marine Institute Ireland and Scripps Institution of Oceanography.

Scientific Objectives

  • To determine the seasonality of physical gradients and exchange across the shelf edge by deploying new observational technologies (gliders, Autosub Long Range) and established techniques (long term moorings, drifters)
  • To quantify key exchange mechanisms and to collect new data targeted at testing and improving high resolution models of the shelf edge, by carrying out detailed process studies in contrasting regions of the shelf edge of the NE Atlantic margin
  • To develop a new parameterisation of shelf edge exchange processes suitable for regional-scale models, using improved resolution numerical, and new empirical models constrained by the observations
  • To test the new parameterisations in a regional model in the context of making an assessment of inter-annual variability of ocean-shelf exchange.

Fieldwork

Three survey sites on the UK shelf edge have been selected for FASTNEt. These are a) the Celtic Sea shelf edge, b) Malin shelf and c) North Scotland shelf. Fieldwork is centred around two research cruises. The first, to the Celtic Sea, on RRS Discovery in June 2012. The second cruise visits the Malin shelf on RRS James Cook, during summer 2013. In addition to these dedicated cruises, opportunist cruise activity to the North Scotland shelf has been agreed with project partner Marine Scotland Science. Autonomous technologies will complement observations made during the cruises and provide knowledge of seasonal and inter-annual variability in exchange processes.

Instrumentation

Types of instruments/measurements:

  • Gliders
  • Autosub Long Range
  • Drifter buoys
  • Scanfish
  • Microstructure profilers
  • Moored CTD/CT loggers and ADCPs
  • Shipboard measurements: CTD, underway, nutrients (and other discrete sampling), LADCP, ADCP.

Contacts

Collaborator Organisation
Prof. Mark Inall (lead) Scottish Association for Marine Science, U.K
Dr. Jason Holt National Oceanography Centre, U.K
Dr. Peter Miller Plymouth Marine Laboratory, U.K
Dr. Mattias Green Bangor University, U.K
Prof. Jonathan Sharples University of Liverpool, U.K
Dr. Vasyl Vlasenko University of Plymouth, U.K

Data Activity or Cruise Information

Data Activity

Start Date (yyyy-mm-dd) 2013-07-04
End Date (yyyy-mm-dd) 2013-07-19
Organization Undertaking ActivityScottish Association for Marine Science
Country of OrganizationUnited Kingdom
Originator's Data Activity IdentifierJC088_SG_(bed-frame)
Platform Categorysubsurface mooring

FASTNEt bed frame mooring SG

The short term mooring SG bed frame was deployed and recovered during cruise RRS James Cook JC088 as part of the Fluxes Across the Sloping Topography of the North East Atlantic (FASTNEt) project.

Instruments deployed on the mooring

Depth (m) Instrument type Serial number
116 SBE16 + (Pumped conductivity and digiquartz pressure) 5309
116 Sontek ADVs D281
116 150 kHz Flowquest ADCP 11625
113 Acoustic Release 1 71922
- Acoustic Release 2 70355

Related Data Activity activities are detailed in Appendix 1

Cruise

Cruise Name JC088
Departure Date 2013-06-28
Arrival Date 2013-07-24
Principal Scientist(s)Mark E Inall (Scottish Association for Marine Science)
Ship RRS James Cook

Complete Cruise Metadata Report is available here


Fixed Station Information


No Fixed Station Information held for the Series


BODC Quality Control Flags

The following single character qualifying flags may be associated with one or more individual parameters with a data cycle:

Flag Description
Blank Unqualified
< Below detection limit
> In excess of quoted value
A Taxonomic flag for affinis (aff.)
B Beginning of CTD Down/Up Cast
C Taxonomic flag for confer (cf.)
D Thermometric depth
E End of CTD Down/Up Cast
G Non-taxonomic biological characteristic uncertainty
H Extrapolated value
I Taxonomic flag for single species (sp.)
K Improbable value - unknown quality control source
L Improbable value - originator's quality control
M Improbable value - BODC quality control
N Null value
O Improbable value - user quality control
P Trace/calm
Q Indeterminate
R Replacement value
S Estimated value
T Interpolated value
U Uncalibrated
W Control value
X Excessive difference

SeaDataNet Quality Control Flags

The following single character qualifying flags may be associated with one or more individual parameters with a data cycle:

Flag Description
0 no quality control
1 good value
2 probably good value
3 probably bad value
4 bad value
5 changed value
6 value below detection
7 value in excess
8 interpolated value
9 missing value
A value phenomenon uncertain
B nominal value
Q value below limit of quantification

Appendix 1: JC088_SG_(bed-frame)

Related series for this Data Activity are presented in the table below. Further information can be found by following the appropriate links.

If you are interested in these series, please be aware we offer a multiple file download service. Should your credentials be insufficient for automatic download, the service also offers a referral to our Enquiries Officer who may be able to negotiate access.

Series IdentifierData CategoryStart date/timeStart positionCruise
1364632Currents -subsurface Eulerian2013-07-04 12:32:5855.79717 N, 8.604 WRRS James Cook JC088
1364644Currents -subsurface Eulerian2013-07-05 00:00:5855.79717 N, 8.604 WRRS James Cook JC088
1364656Currents -subsurface Eulerian2013-07-06 00:00:5855.79717 N, 8.604 WRRS James Cook JC088
1364668Currents -subsurface Eulerian2013-07-07 00:00:5855.79717 N, 8.604 WRRS James Cook JC088
1364681Currents -subsurface Eulerian2013-07-08 00:00:5855.79717 N, 8.604 WRRS James Cook JC088
1364693Currents -subsurface Eulerian2013-07-09 00:00:5855.79717 N, 8.604 WRRS James Cook JC088
1364700Currents -subsurface Eulerian2013-07-10 00:00:5855.79717 N, 8.604 WRRS James Cook JC088
1364712Currents -subsurface Eulerian2013-07-11 00:00:5855.79717 N, 8.604 WRRS James Cook JC088
1364724Currents -subsurface Eulerian2013-07-12 00:00:5855.79717 N, 8.604 WRRS James Cook JC088
1364736Currents -subsurface Eulerian2013-07-13 00:00:5855.79717 N, 8.604 WRRS James Cook JC088
1364748Currents -subsurface Eulerian2013-07-14 00:00:5855.79717 N, 8.604 WRRS James Cook JC088
1364761Currents -subsurface Eulerian2013-07-15 00:00:5855.79717 N, 8.604 WRRS James Cook JC088
1364773Currents -subsurface Eulerian2013-07-16 00:00:5855.79717 N, 8.604 WRRS James Cook JC088
1364785Currents -subsurface Eulerian2013-07-17 00:00:5855.79717 N, 8.604 WRRS James Cook JC088
1364797Currents -subsurface Eulerian2013-07-18 00:00:5855.79717 N, 8.604 WRRS James Cook JC088
1364804Currents -subsurface Eulerian2013-07-19 00:00:5855.79717 N, 8.604 WRRS James Cook JC088