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Metadata Report for BODC Series Reference Number 2003287


Metadata Summary

Data Description

Data Category Water sample data
Instrument Type
NameCategories
Niskin bottle  discrete water samplers
SPX Bran+Luebbe colorimetric Autoanalyser 3  colorimeters; autoanalysers
Instrument Mounting lowered unmanned submersible
Originating Country United Kingdom
Originator Mr Malcolm Woodward
Originating Organization Plymouth Marine Laboratory
Processing Status banked
Online delivery of data Download available - Ocean Data View (ODV) format
Project(s) PML National Capability
 

Data Identifiers

Originator's Identifier DY084_CTD_NUTS_62:CTD059
BODC Series Reference 2003287
 

Time Co-ordinates(UT)

Start Time (yyyy-mm-dd hh:mm) 2017-10-22 14:24
End Time (yyyy-mm-dd hh:mm) -
Nominal Cycle Interval -
 

Spatial Co-ordinates

Latitude 31.31287 S ( 31° 18.8' S )
Longitude 26.18904 W ( 26° 11.3' W )
Positional Uncertainty 0.1 to 0.5 n.miles
Minimum Sensor or Sampling Depth 5.4 m
Maximum Sensor or Sampling Depth 508.1 m
Minimum Sensor or Sampling Height 3999.6 m
Maximum Sensor or Sampling Height 4502.3 m
Sea Floor Depth 4507.7 m
Sea Floor Depth Source PEVENT
Sensor or Sampling Distribution Unspecified -
Sensor or Sampling Depth Datum Unspecified -
Sea Floor Depth Datum Instantaneous - Depth measured below water line or instantaneous water body surface
 

Parameters

BODC CODERankUnitsTitle
ADEPZZ011MetresDepth (spatial coordinate) relative to water surface in the water body
BOTTFLAG1Not applicableSampling process quality flag (BODC C22)
FIRSEQID1DimensionlessBottle firing sequence number
NTRIAATX1Micromoles per litreConcentration of nitrite {NO2- CAS 14797-65-0} per unit volume of the water body [dissolved plus reactive particulate phase] by colorimetric autoanalysis
NTRZAATX1Micromoles per litreConcentration of nitrate+nitrite {NO3+NO2} per unit volume of the water body [dissolved plus reactive particulate phase] by colorimetric autoanalysis
PHOSAATX1Micromoles per litreConcentration of phosphate {PO43- CAS 14265-44-2} per unit volume of the water body [dissolved plus reactive particulate phase] by colorimetric autoanalysis
ROSPOSID1DimensionlessBottle rosette position identifier
SAMPRFNM1DimensionlessSample reference number
SLCAAATX1Micromoles per litreConcentration of silicate {SiO44- CAS 17181-37-2} per unit volume of the water body [dissolved plus reactive particulate phase] by colorimetric autoanalysis

Definition of BOTTFLAG

BOTTFLAGDefinition
0The sampling event occurred without any incident being reported to BODC.
1The filter in an in-situ sampling pump physically ruptured during sample resulting in an unquantifiable loss of sampled material.
2Analytical evidence (e.g. surface water salinity measured on a sample collected at depth) indicates that the water sample has been contaminated by water from depths other than the depths of sampling.
3The feedback indicator on the deck unit reported that the bottle closure command had failed. General Oceanics deck units used on NERC vessels in the 80s and 90s were renowned for reporting misfires when the bottle had been closed. This flag is also suitable for when a trigger command is mistakenly sent to a bottle that has previously been fired.
4During the sampling deployment the bottle was fired in an order other than incrementing rosette position. Indicative of the potential for errors in the assignment of bottle firing depth, especially with General Oceanics rosettes.
5Water was reported to be escaping from the bottle as the rosette was being recovered.
6The bottle seals were observed to be incorrectly seated and the bottle was only part full of water on recovery.
7Either the bottle was found to contain no sample on recovery or there was no bottle fitted to the rosette position fired (but SBE35 record may exist).
8There is reason to doubt the accuracy of the sampling depth associated with the sample.
9The bottle air vent had not been closed prior to deployment giving rise to a risk of sample contamination through leakage.

Definition of Rank

  • Rank 1 is a one-dimensional parameter
  • Rank 2 is a two-dimensional parameter
  • Rank 0 is a one-dimensional parameter describing the second dimension of a two-dimensional parameter (e.g. bin depths for moored ADCP data)

Problem Reports

No Problem Report Found in the Database


Data Access Policy

Open Data supplied by Natural Environment Research Council (NERC)

You must always use the following attribution statement to acknowledge the source of the information: "Contains data supplied by Natural Environment Research Council."


Narrative Documents

SPX Bran+Luebbe Autoanalyser 3

The instrument uses continuous flow analysis (CFA) with a continuous stream of material divided by air bubbles into discrete segments in which chemical reactions occur. The continuous stream of liquid samples and reagents are combined and transported in tubing and mixing coils. The tubing passes the samples from one apparatus to the other with each apparatus performing different functions, such as distillation, dialysis, extraction, ion exchange, heating, incubation, and subsequent recording of a signal.

An essential principle of the system is the introduction of air bubbles. The air bubbles segment each sample into discrete packets and act as a barrier between packets to prevent cross contamination as they travel down the length of the tubing. The air bubbles also assist mixing by creating turbulent flow (bolus flow), and provide operators with a quick and easy check of the flow characteristics of the liquid.

Samples and standards are treated in an exactly identical manner as they travel the length of the tubing, eliminating the necessity of a steady state signal, however, since the presence of bubbles create an almost square wave profile, bringing the system to steady state does not significantly decrease throughput and is desirable in that steady state signals (chemical equilibrium) are more accurate and reproducible.

The autoanalyzer can consist of different modules including a sampler, pump, mixing coils, optional sample treatments (dialysis, distillation, heating, etc), a detector, and data generator. Most continuous flow analyzers depend on color reactions using a flow through colorimeter, however other methods have been developed that use ISE, flame photometry, ICAP, fluorometry, and so forth.

More details can be found in the manufacturer's introduction to autoanalysers andinstrument description.

Niskin Bottle

The Niskin bottle is a device used by oceanographers to collect subsurface seawater samples. It is a plastic bottle with caps and rubber seals at each end and is deployed with the caps held open, allowing free-flushing of the bottle as it moves through the water column.

Standard Niskin

The standard version of the bottle includes a plastic-coated metal spring or elastic cord running through the interior of the bottle that joins the two caps, and the caps are held open against the spring by plastic lanyards. When the bottle reaches the desired depth the lanyards are released by a pressure-actuated switch, command signal or messenger weight and the caps are forced shut and sealed, trapping the seawater sample.

Lever Action Niskin

The Lever Action Niskin Bottle differs from the standard version, in that the caps are held open during deployment by externally mounted stainless steel springs rather than an internal spring or cord. Lever Action Niskins are recommended for applications where a completely clear sample chamber is critical or for use in deep cold water.

Clean Sampling

A modified version of the standard Niskin bottle has been developed for clean sampling. This is teflon-coated and uses a latex cord to close the caps rather than a metal spring. The clean version of the Levered Action Niskin bottle is also teflon-coated and uses epoxy covered springs in place of the stainless steel springs. These bottles are specifically designed to minimise metal contamination when sampling trace metals.

Deployment

Bottles may be deployed singly clamped to a wire or in groups of up to 48 on a rosette. Standard bottles and Lever Action bottles have a capacity between 1.7 and 30 L. Reversing thermometers may be attached to a spring-loaded disk that rotates through 180° on bottle closure.

Atlantic Meridional Transect cruise DY084 (AMT27) Micro-molar Nutrients from CTD Bottles

Originator's Protocol for Data Acquisition and Analysis

A total of 79 vertical CTD profiles were carried out along the cruise track, and of these 71 were analysed for nutrients for the Atlantic Meridional Transect (AMT) Project. Water samples were collected from a 24 x 20 litre bottle stainless steel framed CTD / Rosette system (Seabird). Typically, every unique depth was sampled from each CTD cast and these were sub-sampled into clean (acid-washed) 60ml HDPE (Nalgene) sample bottles, which were rinsed x3 with sample seawater prior to filling.

Micro-molar nutrient analysis was carried out using a 4 channel Bran and Luebbe AAIII segmented flow, colourimetric, auto-analyser. Established, proven analytical protocols were used: nitrate (Brewer and Riley, 1965), nitrite (Grasshoff,K., 1976), phosphate and silicate (Kirkwood, D.S., 1989).

References Cited

Brewer P. G. and Riley, J. P. 1965. The automatic determination of nitrate in seawater. Deep Sea Research, 12: 765-772

Grasshoff, K., 1976. Methods of sea-water analysis, Verlag Chemie, Weiheim: pp.317.

Kirkwood, D.S. 1989. Simultaneous determination of selected nutrients in sea-water, ICES CM 1989/C:29

Further information can be found in the DY084 Cruise report.

BODC Data Processing Procedures

Data were received in Excel format and were archived under BODC's accession number PML190012. The data were provided with metadata including CTD number, Niskin bottle number and depth. The metadata provided were matched to the records already held in the BODC database using CTD number and Niskin Bottle number in the majority of cases. Only nutrient samples collected for the AMT project are included in this dataset, those collected for SONIC have been ommitted. The data were loaded into the BODC database using established BODC data banking procedures. A parameter mapping table is provided below:

Originator's Variable Originator's Units BODC Parameter Code BODC Unit Comments
Nitrite umol NTRIAATX umol/l -
Silicate umol SLCAAATX umol/l -
Phosphate umol PHOSAATX umol/l -
Nitrate+Nit umol NTRZAATX umol/l -

Data Quality Report

Some samples supplied were below the limit of detection for the parameter. In these cases, the data were supplied with a < flag and the detection limit. This information was loaded to the BODC database. The detection limits are 0.01 µM (Nitrite); 0.02 µM (Nitrate+Nitrite) and 0.02 µM (Phosphate).


Project Information

PML National Capability

The Plymouth Marine Laboratory National Capability focuses on long term science concerned with basin/decadal variability of the Ocean.


Data Activity or Cruise Information

Data Activity

Start Date (yyyy-mm-dd) 2017-10-22
End Date (yyyy-mm-dd) 2017-10-22
Organization Undertaking ActivityPlymouth Marine Laboratory
Country of OrganizationUnited Kingdom
Originator's Data Activity IdentifierDY084_CTD_CTD059
Platform Categorylowered unmanned submersible

No Document Information Held for the Series

Related Data Activity activities are detailed in Appendix 1

Cruise

Cruise Name DY084 (AMT27, DY085)
Departure Date 2017-09-23
Arrival Date 2017-11-05
Principal Scientist(s)Andrew Rees (Plymouth Marine Laboratory), Phyllis Lam (University of Southampton School of Ocean and Earth Science)
Ship RRS Discovery

Complete Cruise Metadata Report is available here


Fixed Station Information


No Fixed Station Information held for the Series


BODC Quality Control Flags

The following single character qualifying flags may be associated with one or more individual parameters with a data cycle:

Flag Description
Blank Unqualified
< Below detection limit
> In excess of quoted value
A Taxonomic flag for affinis (aff.)
B Beginning of CTD Down/Up Cast
C Taxonomic flag for confer (cf.)
D Thermometric depth
E End of CTD Down/Up Cast
G Non-taxonomic biological characteristic uncertainty
H Extrapolated value
I Taxonomic flag for single species (sp.)
K Improbable value - unknown quality control source
L Improbable value - originator's quality control
M Improbable value - BODC quality control
N Null value
O Improbable value - user quality control
P Trace/calm
Q Indeterminate
R Replacement value
S Estimated value
T Interpolated value
U Uncalibrated
W Control value
X Excessive difference

SeaDataNet Quality Control Flags

The following single character qualifying flags may be associated with one or more individual parameters with a data cycle:

Flag Description
0 no quality control
1 good value
2 probably good value
3 probably bad value
4 bad value
5 changed value
6 value below detection
7 value in excess
8 interpolated value
9 missing value
A value phenomenon uncertain
B nominal value
Q value below limit of quantification

Appendix 1: DY084_CTD_CTD059

Related series for this Data Activity are presented in the table below. Further information can be found by following the appropriate links.

If you are interested in these series, please be aware we offer a multiple file download service. Should your credentials be insufficient for automatic download, the service also offers a referral to our Enquiries Officer who may be able to negotiate access.

Series IdentifierData CategoryStart date/timeStart positionCruise
1969409Water sample data2017-10-22 14:24:0031.31287 S, 26.18904 WRRS Discovery DY084 (AMT27, DY085)
2007147Water sample data2017-10-22 14:24:0031.31287 S, 26.18904 WRRS Discovery DY084 (AMT27, DY085)