Search the data

Metadata Report for BODC Series Reference Number 1793813


Metadata Summary

Data Description

Data Category CTD or STD cast
Instrument Type
NameCategories
Sea-Bird SBE 43 Dissolved Oxygen Sensor  dissolved gas sensors
Sea-Bird SBE 911plus CTD  CTD; water temperature sensor; salinity sensor
Benthos PSA-916T Sonar Altimeter  altimeters
Paroscientific 410K Pressure Transducer  water temperature sensor; water pressure sensors
Sea-Bird SBE 3plus (SBE 3P) temperature sensor  water temperature sensor
Sea-Bird SBE 4C conductivity sensor  salinity sensor
Chelsea Technologies Group Aquatracka III fluorometer  fluorometers
Chelsea Technologies Group Alphatracka II transmissometer  transmissometers
Instrument Mounting research vessel
Originating Country United Kingdom
Originator Prof Stuart Cunningham
Originating Organization Scottish Association for Marine Science
Processing Status banked
Online delivery of data Download available - Ocean Data View (ODV) format
Project(s) UK-OSNAP
 

Data Identifiers

Originator's Identifier CTD_PE399_035_2DB
BODC Series Reference 1793813
 

Time Co-ordinates(UT)

Start Time (yyyy-mm-dd hh:mm) 2015-06-29 23:30
End Time (yyyy-mm-dd hh:mm) -
Nominal Cycle Interval 2.0 decibars
 

Spatial Co-ordinates

Latitude 58.84220 N ( 58° 50.5' N )
Longitude 31.03410 W ( 31° 2.0' W )
Positional Uncertainty 0.0 to 0.01 n.miles
Minimum Sensor or Sampling Depth 0.99 m
Maximum Sensor or Sampling Depth 1473.78 m
Minimum Sensor or Sampling Height 8.22 m
Maximum Sensor or Sampling Height 1481.01 m
Sea Floor Depth 1482.0 m
Sea Floor Depth Source CRREP
Sensor or Sampling Distribution Variable common depth - All sensors are grouped effectively at the same depth, but this depth varies significantly during the series
Sensor or Sampling Depth Datum Instantaneous - Depth measured below water line or instantaneous water body surface
Sea Floor Depth Datum Chart reference - Depth extracted from available chart
 

Parameters

BODC CODERankUnitsTitle
ACYCAA011DimensionlessSequence number
AHSFZZ011MetresHeight (spatial coordinate) relative to bed surface in the water body
CNCLCCI11Siemens per metreElectrical conductivity of the water body by in-situ conductivity cell and calibration against independent measurements
CPHLPM011Milligrams per cubic metreConcentration of chlorophyll-a {chl-a CAS 479-61-8} per unit volume of the water body [particulate >unknown phase] by in-situ chlorophyll fluorometer and manufacturer's calibration applied
DEPHPRST1MetresDepth (spatial coordinate) of sampling event start relative to water surface in the water body by profiling pressure sensor and conversion to depth using unspecified algorithm
DOXYSC011Micromoles per litreConcentration of oxygen {O2 CAS 7782-44-7} per unit volume of the water body [dissolved plus reactive particulate phase] by Sea-Bird SBE 43 sensor and calibration against sample data
IRRDUV011MicroEinsteins per square metre per secondDownwelling vector irradiance as photons of electromagnetic radiation (PAR wavelengths) in the water body by cosine-collector radiometer
OXYSZZ011PercentSaturation of oxygen {O2 CAS 7782-44-7} in the water body [dissolved plus reactive particulate phase]
POPTDR011PercentTransmittance (red light wavelength) per 25cm of the water body by 25cm path length red light transmissometer
POTMCV011Degrees CelsiusPotential temperature of the water body by computation using UNESCO 1983 algorithm
PRESPR011DecibarsPressure (spatial coordinate) exerted by the water body by profiling pressure sensor and correction to read zero at sea level
PSALST011DimensionlessPractical salinity of the water body by CTD and computation using UNESCO 1983 algorithm
SIGTPR011Kilograms per cubic metreSigma-theta of the water body by CTD and computation from salinity and potential temperature using UNESCO algorithm
TEMPST011Degrees CelsiusTemperature of the water body by CTD or STD
TOKGPR011Litres per kilogramConversion factor (volume to mass) for the water body by CTD and computation of density (in-situ potential temperature surface pressure) reciprocal from pressure, temperature and salinity

Definition of Rank

  • Rank 1 is a one-dimensional parameter
  • Rank 2 is a two-dimensional parameter
  • Rank 0 is a one-dimensional parameter describing the second dimension of a two-dimensional parameter (e.g. bin depths for moored ADCP data)

Problem Reports

No Problem Report Found in the Database


Data Access Policy

Open Data supplied by Natural Environment Research Council (NERC)

You must always use the following attribution statement to acknowledge the source of the information: "Contains data supplied by Natural Environment Research Council."


Narrative Documents

Sea-Bird Dissolved Oxygen Sensor SBE 43 and SBE 43F

The SBE 43 is a dissolved oxygen sensor designed for marine applications. It incorporates a high-performance Clark polarographic membrane with a pump that continuously plumbs water through it, preventing algal growth and the development of anoxic conditions when the sensor is taking measurements.

Two configurations are available: SBE 43 produces a voltage output and can be incorporated with any Sea-Bird CTD that accepts input from a 0-5 volt auxiliary sensor, while the SBE 43F produces a frequency output and can be integrated with an SBE 52-MP (Moored Profiler CTD) or used for OEM applications. The specifications below are common to both.

Specifications

Housing Plastic or titanium
Membrane

0.5 mil- fast response, typical for profile applications

1 mil- slower response, typical for moored applications

Depth rating

600 m (plastic) or 7000 m (titanium)

10500 m titanium housing available on request

Measurement range 120% of surface saturation
Initial accuracy 2% of saturation
Typical stability 0.5% per 1000 h

Further details can be found in the manufacturer's specification sheet.

Benthos Programmable Sonar Altimeter (PSA) 916 and 916T

The PSA 916 is a submersible altimeter that uses the travel time of an acoustic signal to determine the distance of the instrument from a target surface. It provides the user with high resolution altitude or range data while simultaneously outputting data through a digital serial port. A wide beam angle provides for reliable and accurate range measurements under the most severe operational conditions. The instrument is electronically isolated to eliminate any potential signal interference with host instrument sensors. The PSA 916 is an upgrade of the PSA 900.

The standard model (PSA 916) has an operational depth range of 0 - 6000 m, while the titanium PSA 916T has a depth range of 0 - 10000 m. All other specifications for the two versions are the same.

Specifications

Transmit frequency 200 kHz
Transmit pulse width 250 µs
Beam pattern 14° conical
Pulse repetition rate

internal selection: 5 pps

external selection: up to 5 pps- user controlled

Range

100 m full scale

1.0 m guaranteed minimum

0.8 m typical

Range

1 cm for RS232 output

2.5 cm for analog output

Operating depth 6000 m (PSA 916) or 10000 m (PSA 916T)

Further details can be found in the manufacturer's specification sheets for the PSA 916 and the PSA 916T.

Instrument Description

CTD Unit and Auxillary Sensors

A Sea-Bird 11plus CTD system used on cruise PE399. This was mounted on a 24-way stainless steel rosette frame, equipped with 24 10-litre Niskin bottles. The CTD was fitted with the following scientific sensors:

Sensor Serial Number Last calibration date Comments
Primary Temperature SBE-3P 1219 24 April 2015 -
Primary Conductivity SBE-4C 3262 24 April 2015 -
Benthos PSA-916T Sonar Altimeter 58580 2012 -
Sea-Bird SBE 43 dissolved oxygen sensor 043-1932 23 April 2015 -
Chelsea Alphatracka MKII transmissometer 1406 15 July 2015 -
Chelsea Aquatracka MKIII fluorometer 88-008 22 May 2015 -
Satlantic PAR sensor 0118 19 June 2014 -

Sea-Bird Electronics SBE 911 and SBE 917 series CTD profilers

The SBE 911 and SBE 917 series of conductivity-temperature-depth (CTD) units are used to collect hydrographic profiles, including temperature, conductivity and pressure as standard. Each profiler consists of an underwater unit and deck unit or SEARAM. Auxiliary sensors, such as fluorometers, dissolved oxygen sensors and transmissometers, and carousel water samplers are commonly added to the underwater unit.

Underwater unit

The CTD underwater unit (SBE 9 or SBE 9 plus) comprises a protective cage (usually with a carousel water sampler), including a main pressure housing containing power supplies, acquisition electronics, telemetry circuitry, and a suite of modular sensors. The original SBE 9 incorporated Sea-Bird's standard modular SBE 3 temperature sensor and SBE 4 conductivity sensor, and a Paroscientific Digiquartz pressure sensor. The conductivity cell was connected to a pump-fed plastic tubing circuit that could include auxiliary sensors. Each SBE 9 unit was custom built to individual specification. The SBE 9 was replaced in 1997 by an off-the-shelf version, termed the SBE 9 plus, that incorporated the SBE 3 plus (or SBE 3P) temperature sensor, SBE 4C conductivity sensor and a Paroscientific Digiquartz pressure sensor. Sensors could be connected to a pump-fed plastic tubing circuit or stand-alone.

Temperature, conductivity and pressure sensors

The conductivity, temperature, and pressure sensors supplied with Sea-Bird CTD systems have outputs in the form of variable frequencies, which are measured using high-speed parallel counters. The resulting count totals are converted to numeric representations of the original frequencies, which bear a direct relationship to temperature, conductivity or pressure. Sampling frequencies for these sensors are typically set at 24 Hz.

The temperature sensing element is a glass-coated thermistor bead, pressure-protected inside a stainless steel tube, while the conductivity sensing element is a cylindrical, flow-through, borosilicate glass cell with three internal platinum electrodes. Thermistor resistance or conductivity cell resistance, respectively, is the controlling element in an optimized Wien Bridge oscillator circuit, which produces a frequency output that can be converted to a temperature or conductivity reading. These sensors are available with depth ratings of 6800 m (aluminium housing) or 10500 m (titanium housing). The Paroscientific Digiquartz pressure sensor comprises a quartz crystal resonator that responds to pressure-induced stress, and temperature is measured for thermal compensation of the calculated pressure.

Additional sensors

Optional sensors for dissolved oxygen, pH, light transmission, fluorescence and others do not require the very high levels of resolution needed in the primary CTD channels, nor do these sensors generally offer variable frequency outputs. Accordingly, signals from the auxiliary sensors are acquired using a conventional voltage-input multiplexed A/D converter (optional). Some Sea-Bird CTDs use a strain gauge pressure sensor (Senso-Metrics) in which case their pressure output data is in the same form as that from the auxiliary sensors as described above.

Deck unit or SEARAM

Each underwater unit is connected to a power supply and data logging system: the SBE 11 (or SBE 11 plus) deck unit allows real-time interfacing between the deck and the underwater unit via a conductive wire, while the submersible SBE 17 (or SBE 17 plus) SEARAM plugs directly into the underwater unit and data are downloaded on recovery of the CTD. The combination of SBE 9 and SBE 17 or SBE 11 are termed SBE 917 or SBE 911, respectively, while the combinations of SBE 9 plus and SBE 17 plus or SBE 11 plus are termed SBE 917 plus or SBE 911 plus.

Specifications

Specifications for the SBE 9 plus underwater unit are listed below:

Parameter Range Initial accuracy Resolution at 24 Hz Response time
Temperature -5 to 35°C 0.001°C 0.0002°C 0.065 sec
Conductivity 0 to 7 S m-1 0.0003 S m-1 0.00004 S m-1 0.065 sec (pumped)
Pressure 0 to full scale (1400, 2000, 4200, 6800 or 10500 m) 0.015% of full scale 0.001% of full scale 0.015 sec

Further details can be found in the manufacturer's specification sheet.

Chelsea Technologies Group Aquatracka MKIII fluorometer

The Chelsea Technologies Group Aquatracka MKIII is a logarithmic response fluorometer. Filters are available to enable the instrument to measure chlorophyll, rhodamine, fluorescein and turbidity.

It uses a pulsed (5.5 Hz) xenon light source discharging along two signal paths to eliminate variations in the flashlamp intensity. The reference path measures the intensity of the light source whilst the signal path measures the intensity of the light emitted from the specimen under test. The reference signal and the emitted light signals are then applied to a ratiometric circuit. In this circuit, the ratio of returned signal to reference signal is computed and scaled logarithmically to achieve a wide dynamic range. The logarithmic conversion accuracy is maintained at better than one percent of the reading over the full output range of the instrument.

Two variants of the instrument are available, both manufactured in titanium, capable of operating in depths from shallow water down to 2000 m and 6000 m respectively. The optical characteristics of the instrument in its different detection modes are visible below:

Excitation Chlorophyll a Rhodamine Fluorescein Turbidity
Wavelength (nm) 430 500 485 440*
Bandwidth (nm) 105 70 22 80*
Emission Chlorophyll a Rhodamine Fluorescein Turbidity
Wavelength (nm) 685 590 530 440*
Bandwidth (nm) 30 45 30 80*

* The wavelengths for the turbidity filters are customer selectable but must be in the range 400 to 700 nm. The same wavelength is used in the excitation path and the emission path.

The instrument measures chlorophyll a, rhodamine and fluorescein with a concentration range of 0.01 µg l-1 to 100 µg l-1. The concentration range for turbidity is 0.01 to 100 FTU (other wavelengths are available on request).

The instrument accuracy is ± 0.02 µg l-1 (or ± 3% of the reading, whichever is greater) for chlorophyll a, rhodamine and fluorescein. The accuracy for turbidity, over a 0 - 10 FTU range, is ± 0.02 FTU (or ± 3% of the reading, whichever is greater).

Further details are available from the Aquatracka MKIII specification sheet.

Chelsea Technologies Group ALPHAtracka and ALPHAtracka II transmissometers

The Chelsea Technologies Group ALPHAtracka (the Mark I) and its successor, the ALPHAtracka II (the Mark II), are both accurate (< 0.3 % fullscale) transmissometers that measure the beam attenuation coefficient at 660 nm. Green (565 nm), yellow (590 nm) and blue (470 nm) wavelength variants are available on special order.

The instrument consists of a Transmitter/Reference Assembly and a Detector Assembly aligned and spaced apart by an open support frame. The housing and frame are both manufactured in titanium and are pressure rated to 6000 m depth.

The Transmitter/Reference housing is sealed by an end cap. Inside the housing an LED light source emits a collimated beam through a sealed window. The Detector housing is also sealed by an end cap. A signal photodiode is placed behind a sealed window to receive the collimated beam from the Transmitter.

The primary difference between the ALPHAtracka and ALPHAtracka II is that the Alphatracka II is implemented with surface-mount technology; this has enabled a much smaller diameter pressure housing to be used while retaining exactly the same optical train as in the Mark I. Data from the Mark II version are thus fully compatible with that already obtained with the Mark I. The performance of the Mark II is further enhanced by two electronic developments from Chelsea Technologies Group - firstly, all items are locked in a signal nulling loop of near infinite gain and, secondly, the signal output linearity is inherently defined by digital circuitry only.

Among other advantages noted above, these features ensure that the optical intensity of the Mark II, indicated by the output voltage, is accurately represented by a straight line interpolation between a reading near full-scale under known conditions and a zero reading when blanked off.

For optimum measurements in a wide range of environmental conditions, the Mark I and Mark II are available in 5 cm, 10 cm and 25 cm path length versions. Output is default factory set to 2.5 volts but can be adjusted to 5 volts on request.

Further details about the Mark II instrument are available from the Chelsea Technologies Group ALPHAtrackaII specification sheet.

Paroscientific Absolute Pressure Transducers Series 3000 and 4000

Paroscientific Series 3000 and 4000 pressure transducers use a Digiquartz pressure sensor to provide high accuracy and precision data. The sensor comprises a quartz crystal resonator that responds to pressure-induced stress, and temperature is measured for thermal compensation of the calculated pressure.

The 3000 series of transducers includes one model, the 31K-101, whereas the 4000 series includes several models, listed in the table below. All transducers exhibit repeatability of better than ±0.01% full pressure scale, hysteresis of better than ±0.02% full scale and acceleration sensitivity of ±0.008% full scale /g (three axis average). Pressure resolution is better than 0.0001% and accuracy is typically 0.01% over a broad range of temperatures.

Differences between the models lie in their pressure and operating temperature ranges, as detailed below:

Model Max. pressure (psia) Max. pressure (MPa) Temperature range (°C)
31K-101 1000 6.9 -54 to 107
42K-101 2000 13.8 0 to 125
43K-101 3000 20.7 0 to 125
46K-101 6000 41.4 0 to 125
410K-101 10000 68.9 0 to 125
415K-101 15000 103 0 to 50
420K-101 20000 138 0 to 50
430K-101 30000 207 0 to 50
440K-101 40000 276 0 to 50

Further details can be found in the manufacturer's specification sheet.

BODC Processing

The CTD data were supplied to BODC as 38 MStar files and converted to the BODC internal format (netCDF).

During transfer the originator's variables were mapped to unique BODC parameter codes. The following table shows the parameter mapping.

Originator's variable Units Description BODC Code Units Comments
scan - Scan number - - Not transferred - will be superseded in BODC processing
time - Time - - Not transferred - will be superseded in BODC processing
press decibars Pressure (spatial co-ordinate) exerted by the water body by profiling pressure sensor and corrected to read zero at sea level. PRESPR01 decibars -
altimeter m Height above bed in the water body AHSFZZ01 m -
temp degC Temperature of the water body by CTD TEMPST01 degC -
temp1 degC Temperature of the water body by CTD - - Secondary channel, not retained
cond mS/cm Electrical conductivity of the water body by in-situ conductivity cell and calibration against independent measurements CNCLCCI1 S/m Converted (/10)
cond1 mS/cm Electrical conductivity of the water body by in-situ conductivity cell and calibration against independent measurements - - Secondary channel, not retained
oxygen µmol/kg Concentration of oxygen {O2} per unit volume of the water body [dissolved phase] by Sea-Bird SBE 43 sensor and calibration against sample data DOXYSC01 µmol/l Conversion by BODC to µmol l-1 using TOKGPR01
fluor µg/l Concentration of chlorophyll-a {chl-a} per unit volume of the water body [particulate phase] by in-situ chlorophyll fluorometer and manufacturer's calibration applied CPHLPM01 mg/m3 µg/l=mg/m3
transmittance % Transmittance (red light wavelength) per 25cm of the water body by 25cm path length red light transmissometer POPTDR01 % -
par - Downwelling vector irradiance as photons (PAR wavelengths) in the water body by cosine-collector radiometer IRRDUV01 µE m2s-1 -
psal pss-78 Practical salinity of the water body by CTD and computation using UNESCO 1983 algorithm PSALST01 pss-78 Calculated from calibrated conductivity measurements, by the originator
psal1 pss-78 Practical salinity of the water body by CTD - - Secondary channel, not retained
psal2 pss-78 Practical salinity of the water body by CTD - - Secondary channel, not retained
depth m Depth below surface (sampling event start) of the water body by profiling pressure sensor and conversion to depth using unspecified algorithm. DEPHPRST m -
potemp degC Potential Temperature - - Not transferred - can be calculated from pressure, salinity and temperature
potemp1 degC Potential Temperature - - Not transferred - can be calculated from pressure, salinity and temperature
potemp2 degC Potential Temperature - - Not transferred - can be calculated from pressure, salinity and temperature
- - Saturation of oxygen {o2} in the water body [dissolved plus reactive particulate phase] OXYSZZ01 % Derived by BODC using DOXYSC01, TEMPST01 and PSALST01
- - Potential temperature of the water body by computation using unesco 1983 algorithm POTMCV01 °C Derived by BODC using TEMPST01, PSALST01 and PRESPR01.
- - Sigma-theta of the water body by CTD and computation from salinity and potential temperature using UNESCO algorithm SIGTPR01 kg m-3 Derived by BODC using POTMCV01, PSALST01 and PRESPR01
- - Conversion factor (volume to mass) for the water body by CTD and computation of density (in-situ potential temperature surface pressure) reciprocal from pressure, temperature and salinity TOKGPR01 l kg-1 Derived by BODC using SIGTPR01

Following transfer the data were screened using BODC in-house visualisation software. Suspect data values were assigned the appropriate BODC data quality flag. Missing data values, where present, were changed to the missing data value and assigned a BODC data quality flag

PE399 Originator's CTD data processing

Sampling strategy

A total of 38 CTD casts were performed during the cruise using a Sea-bird SBE 911 plus CTD. At each station profiles of temperature, salinity, dissolved oxygen, transmission and fluorescence were collected. Five of the total 38 casts were used for SBE37 Microcat calibrations. No calibration samples were collected for dissolved oxygen or the other computed parameters. A reference thermometer was mounted on the CTD frame for in situ calibration of the CTD temperature sensor.

Data processing

Raw CTD data were transferred from the Sea-Bird deck unit to a LINUX machine via Sea-Bird software. The binary files are converted using Sea-Bird processing software (SBE Data Processing). The ASCII files were converted to MSTAR format and MEXEC programs run to process the data which included reducing the frequency of the data from 24Hz to 1Hz, calibrating the data, and averaging the downcast to a 2db pressure grid. A calibration was produced for the CTD primary conductivity sensor by merging the salinity sample data with the CTD data. Details of the MEXEC programs used and further details of the processing performed can be found in the cruise report.


Project Information

UK - Overturning in the Subpolar North Atlantic Programme (UK-OSNAP) Programme

UK-OSNAP is part of an international collaboration to establish a transoceanic observing system in the subpolar North Atlantic. The aim is to quantify and understand the Subpolar Gyre's response to local and remote forcing of mass, heat and freshwater fluxes, within the conceptual framework of the Atlantic Meridional Overturning Circulation (AMOC).

UK-OSNAP is developing a new observing system to provide a continuous record of full-depth, trans-basin mass, heat, and freshwater fluxes. Combining these sustained measurements with innovative modelling techniques will enable the project to characterise the circulation and fluxes of the North Atlantic Subpolar Gyre.

UK-OSNAP is funded by the Natural Environment Research Council (NERC). The project is led by the National Oceanography Centre (NOC) with partners in the University of Liverpool, the University of Oxford and the Scottish Association for Marine Science (SAMS). It is a part of international OSNAP that is led by USA and includes 10 further partner groups in Canada, France, Germany, the Netherlands and China. The project involves fieldwork at sea and model studies.

The OSNAP observing system consists of two legs: one extending from southern Labrador to the southwestern tip of Greenland across the mouth of the Labrador Sea (OSNAP West), and the second from the southeastern tip of Greenland to Scotland (OSNAP East). The observing system also includes subsurface floats (OSNAP Floats) in order to trace the pathways of overflow waters in the basin and to assess the connectivity of currents crossing the OSNAP line.

NERC have added an extension to UK-OSNAP, until October 2024. This will result in the UK-OSNAP-Decade: 10 years of observing and understanding the overturning circulation in the subpolar North Atlantic (2014-2024).


Data Activity or Cruise Information

Cruise

Cruise Name PE399 (OSNAP East Leg1)
Departure Date 2015-06-16
Arrival Date 2015-07-08
Principal Scientist(s)Stuart A Cunningham (Scottish Association for Marine Science)
Ship RV Pelagia

Complete Cruise Metadata Report is available here


Fixed Station Information


No Fixed Station Information held for the Series


BODC Quality Control Flags

The following single character qualifying flags may be associated with one or more individual parameters with a data cycle:

Flag Description
Blank Unqualified
< Below detection limit
> In excess of quoted value
A Taxonomic flag for affinis (aff.)
B Beginning of CTD Down/Up Cast
C Taxonomic flag for confer (cf.)
D Thermometric depth
E End of CTD Down/Up Cast
G Non-taxonomic biological characteristic uncertainty
H Extrapolated value
I Taxonomic flag for single species (sp.)
K Improbable value - unknown quality control source
L Improbable value - originator's quality control
M Improbable value - BODC quality control
N Null value
O Improbable value - user quality control
P Trace/calm
Q Indeterminate
R Replacement value
S Estimated value
T Interpolated value
U Uncalibrated
W Control value
X Excessive difference

SeaDataNet Quality Control Flags

The following single character qualifying flags may be associated with one or more individual parameters with a data cycle:

Flag Description
0 no quality control
1 good value
2 probably good value
3 probably bad value
4 bad value
5 changed value
6 value below detection
7 value in excess
8 interpolated value
9 missing value
A value phenomenon uncertain
B nominal value
Q value below limit of quantification