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Metadata Report for BODC Series Reference Number 696559


Metadata Summary

Data Description

Data Category Water column chemistry
Instrument Type Pumped water sample
Instrument Mounting autonomous underwater vehicle
Originating Country United Kingdom
Originator -
Originating Organization University of East Anglia School of Environmental Sciences
Processing Status QC in progress
Online delivery of data Download not available
Project(s) Autosub Under Ice
 

Data Identifiers

Originator's Identifier AQUALAB_M377
BODC Series Reference 696559
 

Time Co-ordinates(UT)

Start Time (yyyy-mm-dd hh:mm) 2004-09-08 23:48
End Time (yyyy-mm-dd hh:mm) 2004-09-09 06:29
Nominal Cycle Interval 1093.0 seconds
 

Spatial Co-ordinates

Southernmost Latitude 68.01381 N ( 68° 0.8' N )
Northernmost Latitude 68.06512 N ( 68° 3.9' N )
Westernmost Longitude 31.83496 W ( 31° 50.1' W )
Easternmost Longitude 31.72909 W ( 31° 43.7' W )
Positional Uncertainty 0.0 to 0.01 n.miles
Minimum Sensor or Sampling Depth -
Maximum Sensor or Sampling Depth -
Minimum Sensor or Sampling Height -
Maximum Sensor or Sampling Height -
Sea Floor Depth -
Sea Floor Depth Source -
Sensor or Sampling Distribution -
Sensor or Sampling Depth Datum -
Sea Floor Depth Datum -
 

Parameters

BODC CODERankUnitsTitle
AADYAA011DaysDate (time from 00:00 01/01/1760 to 00:00 UT on day)
AAFDZZ011DaysTime (time between 00:00 UT and timestamp)
ACYCAA011DimensionlessSequence number
ALATGR011DegreesLatitude north relative to WGS84 by dead reckoning based on GPS and em-log or ADCP
ALONGR011DegreesLongitude east relative to WGS84 by dead reckoning based on GPS and em-log or ADCP
D18OMXWT1Parts per thousandEnrichment of oxygen-18 in water molecules {18O in H2O CAS 14797-71-8} {delta(18)O} in the water body by mass spectrometry
PRESPR011DecibarsPressure (spatial coordinate) exerted by the water body by profiling pressure sensor and correction to read zero at sea level

Definition of Rank

  • Rank 1 is a one-dimensional parameter
  • Rank 2 is a two-dimensional parameter
  • Rank 0 is a one-dimensional parameter describing the second dimension of a two-dimensional parameter (e.g. bin depths for moored ADCP data)

Problem Reports

No Problem Report Found in the Database


Data Access Policy

Open Data supplied by Natural Environment Research Council (NERC)

You must always use the following attribution statement to acknowledge the source of the information: "Contains data supplied by Natural Environment Research Council."


Narrative Documents

James Clark Ross 106b - Autosub AquaLAB delta18O BODC Data Processing

The data were received by BODC in the Matlab .MAT binary format. They were transferred to BODC's QXF format using transfer procedure 390. The table below shows the mapping between the variables include in the submitted data file and BODC's parameter dictionary codes used in the QXF.

Originator's ID Units Description BODC parameter code Units Comment
jday   Julian day AADYAA01 Days since 1-Jan-1760 Conversion by transfer
jday   Julian day AAFDZZ01 Day fraction Conversion by transfer
lat degrees north Latitude of sample ALATGR01 degrees north  
lon degrees east Longitude of sample ALONGR01 degrees east  
d18o parts per thousand Calculated δ18O D18OMXWT parts per thousand  
press decibars Pressure sample was taken at PRESPR01 decibars  

It should be noted that the time, position and pressure of the sample were recorded halfway through the sampling procedure, which takes approximately 20 minutes, during which time the Autosub may travel up to 2.5 km.

Following the transfer to QXF, the data were screened using BODC's in-house visualisation software, EDSERPLO. No problems were found with the data.

James Clark Ross 106b - Autosub AquaLAB delta18O Originator's Data Processing

The AquaLAB water sampler was deployed from the Autosub autonomous underwater vehicle during cruise JCR106b to collect water samples from the mouth of Kangerdlussaq Fjord, East Greenland (68°N, 32°W). The aim was to examine the ratio of oxygen isotopes 16O and 18O in the sampled sea water compared with Vienna Standard Mean Ocean Water (VSMOW).

Prior to deployment of the AquaLAB sampler it was essential to ensure that no water, other than the "prime" water, was left in the sampling bags of the instrument. "Prime" water is contained in the sample bags until the sample is collected in order to prevent the sample bags being crushed, and therefore damaged, by hydrostatic pressure as the Autosub dived to depth during its mission. The procedure outlined below was followed to ensure that the AquaLAB was correctly prepared for deployment:

  • A 25 litre carboy (a glass or plastic container enclosed by a special container) was flushed and filled with surface sea water from the James Clark Ross' uncontaminated surface water supply for use as a prime.
  • Salinity, barium and oxygen isotope samples were taken from the carboy after filling to determine the properties of the surface water.
  • For Autosub mission 377, the surface water had a salinity of 30.862, and an 16O:18O ratio of -2.23% relative to VSMOW
  • The sample bags were then flushed three times with water from the carboy, after which 30 ml of water from the carboy was added to each bag.
  • AquaLAB's mechanical syringe and rotary valve were then flushed with water from the carboy.
  • A second set of salinity and trace element measurements were then taken from the carboy in order to monitor any changes which may have taken place during the procedure.

After the recovery of the AquaLAB, the water samples were transferred from the AquaLAB's sample bags to two 50 ml bottles. The samples were later tested for their 16O:18O ratio compared to VMSOW by using a stable isotope mass spectrometer.

Stable isotope mass spectrometry makes use of the knowledge that the lighter elements of the periodic table (particularly carbon, hydrogen, nitrogen, oxygen and sulphur) occur naturally with more than one atomic mass (the isotopes). As these isotopes do not decay radioactively, they are known as stable isotopes. The mass spectrometer measures the atomic mass of the isotopes present in the sample relative to a standard of known isotopic composition. From these results, the isotopic ratio can be calculated.

Reference

Dodd, P.A., Price, M.R., Heywood, K.J. and Pebody, M. (2006). Collection of water samples from an autonomous underwater vehicle for tracer analysis. Journal of Atmospheric and Oceanic Technology 23(12): 1759-1767

AquaLAB Instrument Description

EnviroTech LLC's AquaLAB is a deep-ocean (up to 6000m) gas tight water sampler capable of collecting 50 samples of up to 1 litre in volume. The samples are collected using a high-integrity 50-port rotary valve and injected into titanium foil or flexible but inelastic medical ethylene vinyl acetate (EVA) bags. The samples are then stored within the instrument for post-recovery analysis.

The sampler is controlled by an onboard computer, which can be programmed to either take samples at pre-determined intervals or when an external controller issues a command to take a sample.

The AquaLAB sampler has been used to:

  • Sample water for trace gas analysis (e.g. CFC, C02,SF6)
  • Sample water during extended deployments of up to one year
  • Determine salinity very accurately
  • Analyse water quality parameters such as nutrient concentration

Specification

Sample size (ml): 0.75 ml to 1 litre with a step interval of 0.75 ml
Number of samples: Up to 50
Sample containers: Purpose made Ti foil bags with a nominal volume of 1 litre each. Other types of flexible sample bags may be used, such as plastic IV bags.
Preservative: Single preservative with the bags either pre-dosed or using a bag attached to one or more ports as a sample reservoir
Layout: Two physically separated modules: the control module and the sampling module
Endurance: Programmable from one sample per minute to one sample per year
Depth capability: 6000 metres

Project Information

AutoSub Under Ice (AUI) Programme

AutoSub was an interdisciplinary Natural Environment Research Council (NERC) thematic programme conceived to investigate the marine environment of floating ice shelves with a view to advancing the understanding of their role in the climate system.

The AUI programme had the following aims:

  • To attain the programme's scientific objectives through an integrated programme based on interdisciplinary collaborations and an international perspective
  • To develop a data management system for the archiving and collation of data collected by the programme, and to facilitate the eventual exploitation of this record by the community
  • To provide high-quality training to develop national expertise in the use of autonomous vehicles in the collection of data from remote environments and the integration of such tools in wider programmes of research
  • To stimulate and facilitate the parameterising of sub-ice shelf processes in climate models, and to further demonstrate the value of autonomous vehicles as platforms for data collection among the wider oceanographic and polar community

Following the invitation of outline bids and peer review of fully developed proposals, eight research threads were funded as part of AUI:

Physical Oceanography

  • ISOTOPE: Ice Shelf Oceanography: Transports, Oxygen-18 and Physical Exchanges.
  • Evolution and impact of Circumpolar Deep Water on the Antarctic continental shelf.
  • Oceanographic conditions and processes beneath Ronne Ice Shelf (OPRIS).

Glaciology and Sea Ice

  • Autosub investigation of ice sheet boundary conditions beneath Pine Island Glacier.
  • Observations and modelling of coastal polynya and sea ice processes in the Arctic and Antarctic.
  • Sea ice thickness distribution in the Bellingshausen Sea.

Geology and Geophysics

  • Marine geological processes and sediments beneath floating ice shelves in Greenland and Antarctica: investigations using the Autosub AUV.

Biology

  • Controls on marine benthic biodiversity and standing stock in ice-covered environments.

The National Oceanography Centre Southampton (NOCS) hosted the AUI programme with ten further institutions collaborating in the project. The project ran from April 2000 until the end of March 2005, with some extensions to projects beyond this date because of research cruise delays. The following cruises were the fieldwork component of the AUI project:

Table 1: Details of the RRS James Clark Ross AUI cruises.

Cruise No. Cruise No. synonyms Dates Areas of study
JR20030218 JR84 28 February 2003 to 4 April 2003 Amundsen Sea, Antarctica
JR20040813 JR106, JR106a, JR106N (North) 10 August 2004 to 30 August 2004 Northeast Greenland Continental Shelf, Greenland
JR20040830 JR106b, JR106S (South) 30 August 2004 to 16 September 2004 Kangerlussuaq Fjord, Greenland
JR20050203 JR97, JR097 3 February 2005 to 11 March 2005 Fimbul Ice Shelf and Weddell Sea, Antarctica . This cruise was redirected from the Filcner-Ronne Ice Shelf to the Fimbul Ice Shelf because of unfavourable sea-ice conditions.

All the cruises utilised the AutoSub autonomous, unmanned and untethered underwater vehicle to collect observations beneath sea-ice and floating ice shelves. AutoSub can be fitted with a range of oceanographic sensors such as:

  • Conductivity Temperature Depth (CTD) instruments
  • Acoustic Doppler Current Profillers (ADCP)
  • A water sampler
  • Swath bathymetry systems
  • Cameras

In addition to use of AutoSub during each cruise measurements were taken from ship. These varied by cruise but included:

  • Ship underway measurements and sampling for parameters such as:
    • Salinity
    • Temperature
    • Fluorescence
    • Oxygen 18 isotope enrichment in water
    • Bathymetry using a swath bathymetry system
  • Full-depth CTD casts for with observations of samples taken for parameters such as:
    • Salinity
    • Temperature
    • Fluorescence
    • Optical transmissivity
    • Dissolved oxygen
    • Oxygen 18 isotope enrichment in water
    • Water CFC content
  • Sea floor photography and video using the WASP system
  • Sea floor sampling with trawls/rock dredges
  • Sea ice observations (ASPeCt), drifters and sampling

The AutoSub project also included numerical modelling work undertaken at University College London, UK.

The project included several firsts including the first along-track observations beneath an ice shelf using an autonomous underwater vehicle. The AutoSub vehicle was developed and enhanced throughout this programme and has now become part of the NERC equipment pool for general use by the scientific community. Further information for each cruise can be found in the respective cruise reports (links in Table 1).


Data Activity or Cruise Information

Cruise

Cruise Name JR20040830 (JR106B)
Departure Date 2004-08-30
Arrival Date 2004-09-16
Principal Scientist(s)Julian A Dowdeswell (University of Cambridge, Scott Polar Research Institute)
Ship RRS James Clark Ross

Complete Cruise Metadata Report is available here


Fixed Station Information


No Fixed Station Information held for the Series


BODC Quality Control Flags

The following single character qualifying flags may be associated with one or more individual parameters with a data cycle:

Flag Description
Blank Unqualified
< Below detection limit
> In excess of quoted value
A Taxonomic flag for affinis (aff.)
B Beginning of CTD Down/Up Cast
C Taxonomic flag for confer (cf.)
D Thermometric depth
E End of CTD Down/Up Cast
G Non-taxonomic biological characteristic uncertainty
H Extrapolated value
I Taxonomic flag for single species (sp.)
K Improbable value - unknown quality control source
L Improbable value - originator's quality control
M Improbable value - BODC quality control
N Null value
O Improbable value - user quality control
P Trace/calm
Q Indeterminate
R Replacement value
S Estimated value
T Interpolated value
U Uncalibrated
W Control value
X Excessive difference

SeaDataNet Quality Control Flags

The following single character qualifying flags may be associated with one or more individual parameters with a data cycle:

Flag Description
0 no quality control
1 good value
2 probably good value
3 probably bad value
4 bad value
5 changed value
6 value below detection
7 value in excess
8 interpolated value
9 missing value
A value phenomenon uncertain
B nominal value
Q value below limit of quantification