Resources

RRS James Cook JC165

Cruise summary report

Cruise Info. 
Ship name (ship code)RRS James Cook (740H)
Cruise identifierJC165
Cruise period2018-05-19 — 2018-06-12
StatusCompleted
Port of departureSouthampton, United Kingdom
Port of returnSouthampton, United Kingdom
PurposeResearch
ObjectivesThe oceanic water column and the underlying seabed change on a variety of temporal and spatial scales. The objective of the Porcupine Abyssal Plain Sustained observatory is to provide high temporal resolution (hours) of an increasing number of variables which are relevant from the perspective of the biology, physics and chemistry over a relatively small spatial scale (30km). The site has been under examination for over 20 years and during that time, substantial changes have been observed in the benthic environment. The intention is to sustain and enhance these observations in order that a deeper understanding is obtained into the processes which operate; in particular the responses to the changes which are currently taking place in the global environment. The objective of the cruise was primarily to service the infrastructure required for continuous sustained observation, and to put these into context using observations from the ship which as yet cannot be carried out autonomously. In parallel to maintaining and extending exisiting measurements, the over view was enhanced by parallel research into the abundance and distribution of seafloor life in relation to incoming food flux and topographic features. These investigations were carried out using a multi instrument observational approach combined with direct sampling. The cruise achieved sampling of the abyssal plain seabed and its fauna via coring, trawling, and baited traps, and left in place a time-lapse camera system for extended (1-year) seafloor observation.
Chief scientistHenry Ruhl (National Oceanography Centre, Southampton)
ProjectPorcupine Abyssal Plain deep ocean observatory
Coordinating bodyNatural Environment Research Council (NERC)
Cruise reportRRS James Cook JC165 cruise report jc165.pdf (9.52 MB) 
Ocean/sea areas 
GeneralCeltic Sea
North East Atlantic Ocean (limit 40W)
SpecificPorcupine Abyssal Plain
Track chartsRRS James Cook JC165 cruise track — jc165trk.pdf (0.29 MB) 
Measurements 
Physical oceanography 
CTD stationsQuantity: number of profiles = 13
Description: CTD measurements of pressure, salinity, temperature, oxygen, chlorophyll, plus water samples from some CTDs for chlorophyll, oxygen, salinity, DIC and Ammonia
Biology and fisheries 
Particulate organic matter (inc POC, PON)Quantity: number of stations = 10
Description: HyBIS towed camera
ZooplanktonQuantity: number of stations = 16
Description: WP2, plankton net, 200 microns, to 200 m, 3 x midnight, 3 x noon
ZoobenthosQuantity: number of hauls = 2
Description: Otter trawl samples of megabenthos
ZoobenthosQuantity: number of stations = 29
Description: Megacore sediment samples for various analyses
Demersal fishQuantity: number of hauls = 2
Description: Otter trawl samples of megabenthos
MolluscsQuantity: number of hauls = 2
Description: Otter trawl samples of megabenthos
CrustaceansQuantity: number of hauls = 2
Description: Otter trawl samples of megabenthos
Moorings, landers, buoys 
Physical oceanography 
Optics (eg underwater light levels)49° 0' 0" N  16° 19' 59" W — PAP1 Longterm Observatory Deployment
Optics (eg underwater light levels)48° 0' 0" N  16° 23' 59" W — PAP1 Longterm Observatory Recovery
Current meters48° 0' 0" N  16° 26' 59" W — PAP3 deepwater sediment traps Recovery
Current meters49° 0' 0" N  16° 30' 0" W — PAP3 deepwater sediment traps Deployment
Chemical oceanography 
Oxygen49° 0' 0" N  16° 30' 0" W — PAP3 deepwater sediment traps Deployment
Oxygen48° 0' 0" N  16° 23' 59" W — PAP1 Longterm Observatory Recovery
Oxygen49° 0' 0" N  16° 19' 59" W — PAP1 Longterm Observatory Deployment
Oxygen48° 0' 0" N  16° 26' 59" W — PAP3 deepwater sediment traps Recovery
Carbon dioxide48° 0' 0" N  16° 23' 59" W — PAP1 Longterm Observatory Recovery
Carbon dioxide49° 0' 0" N  16° 19' 59" W — PAP1 Longterm Observatory Deployment
Nitrate48° 0' 0" N  16° 23' 59" W — PAP1 Longterm Observatory Recovery
Nitrate49° 0' 0" N  16° 19' 59" W — PAP1 Longterm Observatory Deployment
pH48° 0' 0" N  16° 23' 59" W — PAP1 Longterm Observatory Recovery
pH49° 0' 0" N  16° 19' 59" W — PAP1 Longterm Observatory Deployment
Biology and fisheries 
Primary productivity49° 0' 0" N  16° 19' 59" W — PAP1 Longterm Observatory Deployment
Primary productivity48° 0' 0" N  16° 23' 59" W — PAP1 Longterm Observatory Recovery
Sediment traps48° 0' 0" N  16° 26' 59" W — PAP3 deepwater sediment traps Recovery
Sediment traps49° 0' 0" N  16° 30' 0" W — PAP3 deepwater sediment traps Deployment
Zooplankton48° 0' 0" N  16° 23' 59" W — PAP1 Longterm Observatory Recovery
Zooplankton49° 0' 0" N  16° 19' 59" W — PAP1 Longterm Observatory Deployment
Zoobenthos49° 0' 0" N  16° 23' 59" W — Time-lapse camera deployment
Zoobenthos48° 49' 59" N  16° 30' 0" W — 2 x amphipod trap deployment recovery
Crustaceans48° 49' 59" N  16° 30' 0" W — 2 x amphipod trap deployment recovery
Geology and geophysics 
Bottom photography49° 0' 0" N  16° 23' 59" W — Time-lapse camera deployment
Data held at BODC Get data
Series/Profiles 
2  Acoustic current meter
Moored instrument depth
Reference numbers
Sound velocity and travel time in the water column
Date and time
Temperature of the water column
Platform or instrument orientation
Vertical velocity of the water column (currents)
Horizontal velocity of the water column (currents)
Sea level
Moored instrument depth
Reference numbers
Sound velocity and travel time in the water column
Date and time
Temperature of the water column
Platform or instrument orientation
Vertical velocity of the water column (currents)
Horizontal velocity of the water column (currents)
Sea level

BODC idDate/TimeLocationDoc.
20278552018-05-25 13:17:12  — 2019-06-30 09:47:12 48° 59' 47" N  16° 29' 43" W  View metadata report for BODC series reference number 2027855
20278432018-05-25 13:20:02  — 2019-06-30 09:20:02 48° 59' 47" N  16° 29' 43" W  View metadata report for BODC series reference number 2027843
32  Bottle station
Reference numbers
Total dissolved inorganic carbon (TCO2) concentration in the water column
Nitrite concentration parameters in the water column
Phosphate concentration parameters in the water column
Vertical spatial coordinates
Dissolved oxygen parameters in the water column
Silicate concentration parameters in the water column
Nitrate concentration parameters in the water column
Quality control flags
Alkalinity, acidity and pH of the water column
Reference numbers
Total dissolved inorganic carbon (TCO2) concentration in the water column
Nitrite concentration parameters in the water column
Phosphate concentration parameters in the water column
Vertical spatial coordinates
Dissolved oxygen parameters in the water column
Silicate concentration parameters in the water column
Nitrate concentration parameters in the water column
Quality control flags
Alkalinity, acidity and pH of the water column

BODC idDate/TimeLocationDoc.
19289992018-05-23 14:58 48° 59' 16" N  16° 23' 19" W  View metadata report for BODC series reference number 1928999
19290022018-05-25 07:38 49° 0' 14" N  16° 29' 35" W  View metadata report for BODC series reference number 1929002
21157992018-05-23 14:58 48° 59' 16" N  16° 23' 19" W  View metadata report for BODC series reference number 2115799
19169252018-06-07 14:27 48° 56' 42" N  16° 25' 36" W  View metadata report for BODC series reference number 1916925
19168692018-05-27 14:17 49° 0' 22" N  16° 28' 17" W  View metadata report for BODC series reference number 1916869
21158792018-06-01 16:43:30 49° 0' 8" N  16° 30' 30" W  View metadata report for BODC series reference number 2115879
21158802018-06-07 12:21 48° 56' 42" N  16° 25' 36" W  View metadata report for BODC series reference number 2115880
21157872018-05-22 14:29:30 49° 0' 11" N  16° 23' 40" W  View metadata report for BODC series reference number 2115787
19168702018-05-27 17:29 49° 0' 22" N  16° 28' 17" W  View metadata report for BODC series reference number 1916870
19169012018-06-01 16:44 49° 0' 8" N  16° 30' 30" W  View metadata report for BODC series reference number 1916901
21158182018-05-25 14:08 48° 59' 40" N  16° 24' 2" W  View metadata report for BODC series reference number 2115818
19169132018-06-07 12:21 48° 56' 42" N  16° 25' 36" W  View metadata report for BODC series reference number 1916913
19289872018-05-22 14:30 49° 0' 11" N  16° 23' 40" W  View metadata report for BODC series reference number 1928987
19290632018-06-01 13:23 49° 0' 8" N  16° 30' 30" W  View metadata report for BODC series reference number 1929063
19290872018-06-07 12:21 48° 56' 42" N  16° 25' 36" W  View metadata report for BODC series reference number 1929087
19168452018-05-25 07:38 49° 0' 14" N  16° 29' 35" W  View metadata report for BODC series reference number 1916845
19290512018-05-29 14:08 48° 0' 3" N  16° 30' 11" W  View metadata report for BODC series reference number 1929051
19290752018-06-01 16:44 49° 0' 8" N  16° 30' 30" W  View metadata report for BODC series reference number 1929075
19290992018-06-07 14:27 48° 56' 42" N  16° 25' 36" W  View metadata report for BODC series reference number 1929099
21158672018-06-01 13:22:30 49° 0' 8" N  16° 30' 30" W  View metadata report for BODC series reference number 2115867
19168942018-06-01 13:23 49° 0' 8" N  16° 30' 30" W  View metadata report for BODC series reference number 1916894
19290382018-05-27 17:29 49° 0' 22" N  16° 28' 17" W  View metadata report for BODC series reference number 1929038
21158062018-05-25 07:38:20 49° 0' 14" N  16° 29' 35" W  View metadata report for BODC series reference number 2115806
19168332018-05-23 14:58 48° 59' 16" N  16° 23' 19" W  View metadata report for BODC series reference number 1916833
19168572018-05-25 14:08 48° 59' 40" N  16° 24' 2" W  View metadata report for BODC series reference number 1916857
19168822018-05-29 14:08 48° 0' 3" N  16° 30' 11" W  View metadata report for BODC series reference number 1916882
19290142018-05-25 14:08 48° 59' 40" N  16° 24' 2" W  View metadata report for BODC series reference number 1929014
19290262018-05-27 14:17 49° 0' 22" N  16° 28' 17" W  View metadata report for BODC series reference number 1929026
21158312018-05-27 14:17 49° 0' 22" N  16° 28' 17" W  View metadata report for BODC series reference number 2115831
21158432018-05-27 17:28:30 49° 0' 22" N  16° 28' 17" W  View metadata report for BODC series reference number 2115843
21158552018-05-29 14:08 48° 0' 3" N  16° 30' 11" W  View metadata report for BODC series reference number 2115855
21158922018-06-07 14:27 48° 56' 42" N  16° 25' 36" W  View metadata report for BODC series reference number 2115892
12  CTD/STD cast
Reference numbers
Transmittance and attenuance of the water column
Salinity of the water column
Optical backscatter
Vertical spatial coordinates
Dissolved oxygen parameters in the water column
Temperature of the water column
Density of the water column
Electrical conductivity of the water column
Chlorophyll pigment concentrations in water bodies
Reference numbers
Transmittance and attenuance of the water column
Salinity of the water column
Optical backscatter
Vertical spatial coordinates
Dissolved oxygen parameters in the water column
Temperature of the water column
Density of the water column
Electrical conductivity of the water column
Chlorophyll pigment concentrations in water bodies

BODC idDate/TimeLocationDoc.
20147832018-06-01 15:00:37 49° 0' 8" N  16° 30' 30" W  View metadata report for BODC series reference number 2014783
20147092018-05-23 12:29:14 48° 59' 16" N  16° 23' 19" W  View metadata report for BODC series reference number 2014709
20148022018-06-07 14:32:08 48° 56' 42" N  16° 25' 36" W  View metadata report for BODC series reference number 2014802
20147462018-05-27 16:07:57 49° 0' 23" N  16° 28' 17" W  View metadata report for BODC series reference number 2014746
20146912018-05-22 14:03:19 49° 0' 11" N  16° 23' 40" W  View metadata report for BODC series reference number 2014691
20147342018-05-27 14:22:35 49° 0' 23" N  16° 28' 17" W  View metadata report for BODC series reference number 2014734
20147102018-05-25 07:28:40 49° 0' 9" N  16° 29' 35" W  View metadata report for BODC series reference number 2014710
20147222018-05-25 12:09:18 48° 59' 40" N  16° 24' 2" W  View metadata report for BODC series reference number 2014722
20147582018-05-29 14:09:48 49° 0' 3" N  16° 30' 11" W  View metadata report for BODC series reference number 2014758
20146782018-05-22 12:07:44 49° 0' 11" N  16° 23' 40" W  View metadata report for BODC series reference number 2014678
20147712018-06-01 13:03:19 49° 0' 8" N  16° 30' 30" W  View metadata report for BODC series reference number 2014771
20147952018-06-07 12:23:29 48° 56' 42" N  16° 25' 36" W  View metadata report for BODC series reference number 2014795
1  Fluorometers
Reference numbers
Date and time
Temperature of the water column
Concentration of suspended particulate material in the water column
Sea level
Chlorophyll pigment concentrations in water bodies
Reference numbers
Date and time
Temperature of the water column
Concentration of suspended particulate material in the water column
Sea level
Chlorophyll pigment concentrations in water bodies

BODC idDate/TimeLocationDoc.
20224332018-06-04 10:23:06  — 2019-06-25 06:23:12 48° 51' 51" N  16° 25' 23" W  View metadata report for BODC series reference number 2022433
3  In-situ dissolved gas analyser
Reference numbers
Date and time
Temperature of the water column
Dissolved concentration parameters for other gases in the water column
Partial pressure (pCO2) and fugacity (fCO2) of carbon dioxide in the water column
Reference numbers
Date and time
Temperature of the water column
Dissolved concentration parameters for other gases in the water column
Partial pressure (pCO2) and fugacity (fCO2) of carbon dioxide in the water column

BODC idDate/TimeLocationDoc.
20120692018-06-04 12:11  — 2018-07-14 12:11:06 48° 51' 51" N  16° 25' 23" W  View metadata report for BODC series reference number 2012069
20121252018-06-04 00:10  — 2019-06-25 00:10:19 48° 51' 51" N  16° 25' 23" W  View metadata report for BODC series reference number 2012125
20149802018-06-04 09:50:59  — 2018-11-10 22:51 48° 51' 51" N  16° 25' 23" W  View metadata report for BODC series reference number 2014980
1  In-situ nutrient analyser
Reference numbers
Date and time
Nitrate concentration parameters in the water column
Reference numbers
Date and time
Nitrate concentration parameters in the water column

BODC idDate/TimeLocationDoc.
20267232018-06-04 09:20  — 2019-06-25 01:20 48° 51' 51" N  16° 25' 23" W  View metadata report for BODC series reference number 2026723
1  Meteorological data logger
Horizontal spatial co-ordinates
Air pressure
Visible waveband radiance and irradiance measurements in the atmosphere
Date and time
Wind strength and direction
Raw light meter output
Air temperature
Solar Radiation
Atmospheric humidity
Horizontal spatial co-ordinates
Air pressure
Visible waveband radiance and irradiance measurements in the atmosphere
Date and time
Wind strength and direction
Raw light meter output
Air temperature
Solar Radiation
Atmospheric humidity

BODC idDate/TimeLocationDoc.
19037972018-05-19 08:59:43  — 2018-06-12 08:04:43 48° 8' 10" N  17° 4' 23" W — 50° 53' 30" N  0° 57' 57" W  View metadata report for BODC series reference number 1903797
4  Moored CTD
Reference numbers
Sound velocity and travel time in the water column
Date and time
Salinity of the water column
Dissolved oxygen parameters in the water column
Temperature of the water column
Density of the water column
Electrical conductivity of the water column
Sea level
Reference numbers
Sound velocity and travel time in the water column
Date and time
Salinity of the water column
Dissolved oxygen parameters in the water column
Temperature of the water column
Density of the water column
Electrical conductivity of the water column
Sea level

BODC idDate/TimeLocationDoc.
20461462018-06-04 09:30:01  — 2019-06-25 08:30:37 48° 51' 51" N  16° 25' 23" W  View metadata report for BODC series reference number 2046146
20488352018-05-25 12:00:01  — 2019-06-30 08:30:01 48° 59' 47" N  16° 29' 44" W  View metadata report for BODC series reference number 2048835
20130002018-06-04 09:30:04  — 2019-06-25 09:00:04 48° 51' 51" N  16° 25' 23" W  View metadata report for BODC series reference number 2013000
20129972018-06-04 09:30:01  — 2019-06-25 09:00:01 48° 51' 51" N  16° 25' 23" W  View metadata report for BODC series reference number 2012997
1  Multi-beam echosounder
Horizontal spatial co-ordinates
Date and time
Platform or instrument orientation
Horizontal platform movement
Bathymetry and Elevation
Horizontal spatial co-ordinates
Date and time
Platform or instrument orientation
Horizontal platform movement
Bathymetry and Elevation

BODC idDate/TimeLocationDoc.
19037852018-05-19 08:59:43  — 2018-06-12 08:04:43 48° 8' 10" N  17° 4' 23" W — 50° 53' 30" N  0° 57' 57" W  View metadata report for BODC series reference number 1903785
2  Multiple instrument types
Reference numbers
Horizontal spatial co-ordinates
Transmittance and attenuance of the water column
Date and time
Salinity of the water column
Dissolved oxygen parameters in the water column
Temperature of the water column
Raw fluorometer output
Electrical conductivity of the water column
Metadata parameters
Raw suspended particulate material concentration sensor output
Chlorophyll pigment concentrations in water bodies
Reference numbers
Horizontal spatial co-ordinates
Transmittance and attenuance of the water column
Date and time
Salinity of the water column
Dissolved oxygen parameters in the water column
Temperature of the water column
Raw fluorometer output
Electrical conductivity of the water column
Metadata parameters
Raw suspended particulate material concentration sensor output
Chlorophyll pigment concentrations in water bodies

BODC idDate/TimeLocationDoc.
19038042018-05-19 08:59:43  — 2018-06-12 08:04:43 48° 8' 10" N  17° 4' 23" W — 50° 53' 30" N  0° 57' 57" W  View metadata report for BODC series reference number 1903804
20130122018-06-04 09:30  — 2019-06-25 16:30 48° 51' 51" N  16° 25' 23" W  View metadata report for BODC series reference number 2013012
1  Pumped water sample
Horizontal spatial co-ordinates
Total dissolved inorganic carbon (TCO2) concentration in the water column
Date and time
Alkalinity, acidity and pH of the water column
Horizontal spatial co-ordinates
Total dissolved inorganic carbon (TCO2) concentration in the water column
Date and time
Alkalinity, acidity and pH of the water column

BODC idDate/TimeLocationDoc.
19281882018-06-07 08:17  — 2018-06-11 16:58 48° 56' 42" N  16° 49' 6" W — 49° 56' 25" N  4° 17' 48" W  View metadata report for BODC series reference number 1928188
1  Transmissometer
Reference numbers
Date and time
Visible waveband radiance and irradiance measurements in the water column
Reference numbers
Date and time
Visible waveband radiance and irradiance measurements in the water column

BODC idDate/TimeLocationDoc.
20042292018-06-04 09:47:05  — 2018-06-14 07:18:24 48° 51' 51" N  16° 25' 23" W  View metadata report for BODC series reference number 2004229
1  radiometers
Reference numbers
Date and time
Visible waveband radiance and irradiance measurements in the water column
Reference numbers
Date and time
Visible waveband radiance and irradiance measurements in the water column

BODC idDate/TimeLocationDoc.
19757162018-06-04 09:47:05  — 2018-07-14 12:48:24 48° 51' 51" N  16° 25' 23" W  View metadata report for BODC series reference number 1975716
Discrete samples 
12  CTD frame plus rosette sampler
2  Instrument mooring
20  Sample taken from ship's non-toxic supply