Metadata Report for BODC Series Reference Number 883742
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Public domain data
These data have no specific confidentiality restrictions for users. However, users must acknowledge data sources as it is not ethical to publish data without proper attribution. Any publication or other output resulting from usage of the data should include an acknowledgment.
The recommended acknowledgment is
"This study uses data from the data source/organisation/programme, provided by the British Oceanographic Data Centre and funded by the funding body."
Sea-Bird Electronics SBE 911 and SBE 917 series CTD profilers
The SBE 911 and SBE 917 series of conductivity-temperature-depth (CTD) units are used to collect hydrographic profiles, including temperature, conductivity and pressure as standard. Each profiler consists of an underwater unit and deck unit or SEARAM. Auxiliary sensors, such as fluorometers, dissolved oxygen sensors and transmissometers, and carousel water samplers are commonly added to the underwater unit.
The CTD underwater unit (SBE 9 or SBE 9 plus) comprises a protective cage (usually with a carousel water sampler), including a main pressure housing containing power supplies, acquisition electronics, telemetry circuitry, and a suite of modular sensors. The original SBE 9 incorporated Sea-Bird's standard modular SBE 3 temperature sensor and SBE 4 conductivity sensor, and a Paroscientific Digiquartz pressure sensor. The conductivity cell was connected to a pump-fed plastic tubing circuit that could include auxiliary sensors. Each SBE 9 unit was custom built to individual specification. The SBE 9 was replaced in 1997 by an off-the-shelf version, termed the SBE 9 plus, that incorporated the SBE 3 plus (or SBE 3P) temperature sensor, SBE 4C conductivity sensor and a Paroscientific Digiquartz pressure sensor. Sensors could be connected to a pump-fed plastic tubing circuit or stand-alone.
Temperature, conductivity and pressure sensors
The conductivity, temperature, and pressure sensors supplied with Sea-Bird CTD systems have outputs in the form of variable frequencies, which are measured using high-speed parallel counters. The resulting count totals are converted to numeric representations of the original frequencies, which bear a direct relationship to temperature, conductivity or pressure. Sampling frequencies for these sensors are typically set at 24 Hz.
The temperature sensing element is a glass-coated thermistor bead, pressure-protected inside a stainless steel tube, while the conductivity sensing element is a cylindrical, flow-through, borosilicate glass cell with three internal platinum electrodes. Thermistor resistance or conductivity cell resistance, respectively, is the controlling element in an optimized Wien Bridge oscillator circuit, which produces a frequency output that can be converted to a temperature or conductivity reading. These sensors are available with depth ratings of 6800 m (aluminium housing) or 10500 m (titanium housing). The Paroscientific Digiquartz pressure sensor comprises a quartz crystal resonator that responds to pressure-induced stress, and temperature is measured for thermal compensation of the calculated pressure.
Optional sensors for dissolved oxygen, pH, light transmission, fluorescence and others do not require the very high levels of resolution needed in the primary CTD channels, nor do these sensors generally offer variable frequency outputs. Accordingly, signals from the auxiliary sensors are acquired using a conventional voltage-input multiplexed A/D converter (optional). Some Sea-Bird CTDs use a strain gauge pressure sensor (Senso-Metrics) in which case their pressure output data is in the same form as that from the auxiliary sensors as described above.
Deck unit or SEARAM
Each underwater unit is connected to a power supply and data logging system: the SBE 11 (or SBE 11 plus) deck unit allows real-time interfacing between the deck and the underwater unit via a conductive wire, while the submersible SBE 17 (or SBE 17 plus) SEARAM plugs directly into the underwater unit and data are downloaded on recovery of the CTD. The combination of SBE 9 and SBE 17 or SBE 11 are termed SBE 917 or SBE 911, respectively, while the combinations of SBE 9 plus and SBE 17 plus or SBE 11 plus are termed SBE 917 plus or SBE 911 plus.
Specifications for the SBE 9 plus underwater unit are listed below:
|Parameter||Range||Initial accuracy||Resolution at 24 Hz||Response time|
|Temperature||-5 to 35°C||0.001°C||0.0002°C||0.065 sec|
|Conductivity||0 to 7 S m-1||0.0003 S m-1||0.00004 S m-1||0.065 sec (pumped)|
|Pressure||0 to full scale (1400, 2000, 4200, 6800 or 10500 m)||0.015% of full scale||0.001% of full scale||0.015 sec|
Further details can be found in the manufacturer's specification sheet.
RV Belgica 9322 (Leg A) CTD Data Documentation
The CTD profiles were taken with the SeaBird SBE9 SCTD system. The instrument has enclosed conductivity and temperature sensors supplied with water by a pump. The water inlet was at the base of the bottle rosette. When not in use, the sensors were bathed in MilliQ water. SeaBird temperature sensors are high performance, pressure protected thermistors. A dissolved oxygen sensor was also included on the rig (non-pulsed membrane).
The CTD was periodically sent for calibration to SeaBird's NWRCC facility in Washington State. An average of 4 salinity samples were taken per cast, stored in crown-corked beer bottles, and determined on Beckman salinometer using IOSDL standard seawater. The procedure has come out well in ICES intercalibration exercises. Nevertheless, the Beckman is not considered as accurate as the SeaBird: the bottle data were used as a check for instrument malfunction but not for recalibration. Similarly, temperature sensor performance was monitored against digital reversing thermometers but not recalibrated.
Dissolved oxygen performance was monitored against Winkler titration, done by MUMM or University of Liege, and recalibrated by polynomial - usually linear - if required.
A SeaBird rosette sampler fitted with 12, 10 litre Niskin or Go/Flo bottles was mounted above the frame. The bases of the bottles were level with the pressure sensor with their tops 0.8 m above it. Digital thermometers on water bottles were placed 0.63 m above the CTD temperature sensor.
The CTD sampled at 24Hz but this was automatically reduced to 2Hz by the deck unit. The data were logged on a PC using the SeaBird SEASAVE program.
The CTD was lowered at 0.8-1 m/s. On the upcast, the hauling rate was approximately the same, but is reduced on approach to a bottle firing depth to minimise wake interference.
The SeaBird DATCNV program was used for the conversion from raw binary data into calibrated data in ASCII format that were supplied to BODC.
Data supplied to BODC were binned to 1 m with an independent variable of depth in metres. This was converted to decibars using an inverse (by iteration) of the Saunders and Fofonoff algorithm. The algorithm was checked against data from cruise BG9412 that were supplied with both pressure and depth channels. An empirical examination showed that pressure could be computed from the depth to an accuracy of 0.0001db assuming a latitude of 50 °N. This latitude was therefore assumed from the conversion of the BG9322 depths to pressures.
The data were converted into the BODC internal format to allow the use of in-house software tools, notably the workstation graphics editor. In addition to reformatting, the transfer program applied the following modifications to the data:
Temperature has been converted from ITS68 to ITS90 by dividing the values by 1.00024.
Dissolved oxygen was converted from ml/l to µM by multiplying the values by 44.66.
Reformatted CTD data were transferred onto a high speed graphics workstation. Using a custom in-house graphics editor, the downcasts was manually flagged. The flagging involved marking the top and the bottom of the downcast. The top was set to the point where salinity increased from near zero value to a realistic value for sea water. Additionally, any obvious spikes were manually flagged 'suspect'. In this way none of the original data values were edited or deleted.
Once screened on the workstation, the CTD downcasts (25) were loaded into a database under the Oracle relational database management system and later migrated to the National Oceanographic Database.
The pressures, temperatures and salinities supplied are believed to be accurate. MUMM reported that the dissolved oxygen data showed reasonable agreement with the bottle data set from University of Liege. However, for the sake of internal consistency, the dissolved oxygen sensor performance was calibrated against 97 water bottle samples analysed following the classical Winkler titration procedure.
The recalibration equation obtained was:
|Ocorrected = Oobserved * 0.83 + 52.78 (r2 = 0.89)|
and this has been applied to the data.
Once all screening and calibration procedures were completed, the data set were binned to 2db (casts deeper than 100db) or 1db (casts shallower than 100db). The binning algorithm excluded any data points flagged suspect and attempted linear interpolation over gaps up to 3 bins wide. If any gaps larger than this were encountered, the data in the gaps were set null.
Downcast values corresponding to the bottle firing depths were incorporated into the database. Oxygen saturations have been computed using the algorithm of Benson and Krause (1984).
Benson, B.B., Krause D. (1984). The concentration and isotopic fractionation of oxygen dissolved in fresh water and sea water in equilibrium with the atmosphere. Limnol.Oceanogr. 29 pp.620-632.
Fofonoff, N.P., Millard, R.C. (1982). Algorithms for computation of fundamental properties of seawater. UNESCO Technical Papers in Marine Science. 44.
Ocean Margin EXchange (OMEX) I
OMEX was a European multidisciplinary oceanographic research project that studied and quantified the exchange processes of carbon and associated elements between the continental shelf of western Europe and the open Atlantic Ocean. The project ran in two phases known as OMEX I (1993-1996) and OMEX II - II (1997-2000), with a bridging phase OMEX II - I (1996-1997). The project was supported by the European Union under the second and third phases of its MArine Science and Technology Programme (MAST) through contracts MAS2-CT93-0069 and MAS3-CT97-0076. It was led by Professor Roland Wollast from Université Libre de Bruxelles, Belgium and involved more than 100 scientists from 10 European countries.
The aim of the Ocean Margin EXchange (OMEX) project was to gain a better understanding of the physical, chemical and biological processes occurring at the ocean margins in order to quantify fluxes of energy and matter (carbon, nutrients and other trace elements) across this boundary. The research culminated in the development of quantitative budgets for the areas studied using an approach based on both field measurements and modeling.
OMEX I (1993-1996)
The first phase of OMEX was divided into sub-projects by discipline:
- Biogeochemical Cycles
- Biological Processes
- Benthic Processes
- Carbon Cycling and Biogases
This emphasises the multidisciplinary nature of the research.
The project fieldwork focussed on the region of the European Margin adjacent to the Goban Spur (off the coast of Brittany) and the shelf break off Tromsø, Norway. However, there was also data collected off the Iberian Margin and to the west of Ireland. In all a total of 57 research cruises (excluding 295 Continuous Plankton Recorder tows) were involved in the collection of OMEX I data.
Field data collected during OMEX I have been published by BODC as a CD-ROM product, entitled:
- OMEX I Project Data Set (two discs)
Further descriptions of this product and order forms may be found on the BODC web site.
The data are also held in BODC's databases and subsets may be obtained by request from BODC.
|Principal Scientist(s)||Roland Wollast (Free University of Brussels, Laboratory of Chemical Oceanography and Water Geochemistry)|
Complete Cruise Metadata Report is available here
Fixed Station Information
|Station Name||OMEX I site OMEX2|
|Latitude||49° 11.46' N|
|Longitude||12° 48.00' W|
|Water depth below MSL||1418.0 m|
OMEX I Moored Instrument and CTD site OMEX2
OMEX2 was one of four fixed stations for the OMEX I project. It was visited by twelve cruises and collected a variety of data during the period June 1993 to October 1995. These include:
- Mooring deployments - Aandeera current meters with transmissometers
- CTD casts
- Net trawls
- Plankton recorders
- Water samples
The data collected a site OMEX2 lay within a box bounded by co-ordinates 49° 6.72'N, 013° 16.03'W at the southwest corner and 49° 17.2'N, 012° 44.4'W at the northeast corner, with an approximate depth of 1500 metres.
Related Fixed Station activities are detailed in Appendix 1
The following single character qualifying flags may be associated with one or more individual parameters with a data cycle:
|<||Below detection limit|
|>||In excess of quoted value|
|A||Taxonomic flag for affinis (aff.)|
|B||Beginning of CTD Down/Up Cast|
|C||Taxonomic flag for confer (cf.)|
|E||End of CTD Down/Up Cast|
|G||Non-taxonomic biological characteristic uncertainty|
|I||Taxonomic flag for single species (sp.)|
|K||Improbable value - unknown quality control source|
|L||Improbable value - originator's quality control|
|M||Improbable value - BODC quality control|
|O||Improbable value - user quality control|
The following single character qualifying flags may be associated with one or more individual parameters with a data cycle:
|0||no quality control|
|2||probably good value|
|3||probably bad value|
|6||value below detection|
|7||value in excess|
|A||value phenomenon uncertain|
|Q||value below limit of quantification|
Appendix 1: OMEX I site OMEX2
Related series for this Fixed Station are presented in the table below. Further information can be found by following the appropriate links.
If you are interested in these series, please be aware we offer a multiple file download service. Should your credentials be insufficient for automatic download, the service also offers a referral to our Enquiries Officer who may be able to negotiate access.
|Series Identifier||Data Category||Start date/time||Start position||Cruise|
|444382||Multiple data types -fixed platform||1993-06-24 20:29:00||49.1885 N, 12.7333 W||FS Poseidon PO200_7|
|319390||Currents -subsurface Eulerian||1993-06-27 11:49:00||49.2872 N, 12.8193 W||FS Poseidon PO200_7|
|319389||Currents -subsurface Eulerian||1993-06-27 12:27:00||49.2872 N, 12.8193 W||FS Poseidon PO200_7|
|920244||CTD or STD cast||1993-06-29 14:29:00||49.193 N, 12.944 W||Valdivia VLD137|
|920256||CTD or STD cast||1993-06-29 15:13:00||49.179 N, 12.957 W||Valdivia VLD137|
|883705||CTD or STD cast||1993-09-25 07:41:00||49.22783 N, 12.80017 W||RV Belgica BG9322A|
|883717||CTD or STD cast||1993-09-25 12:36:00||49.25967 N, 12.80733 W||RV Belgica BG9322A|
|1271492||Water sample data||1993-09-25 12:53:00||49.25973 N, 12.80741 W||RV Belgica BG9322A|
|883729||CTD or STD cast||1993-09-25 15:46:00||49.26067 N, 12.81033 W||RV Belgica BG9322A|
|883730||CTD or STD cast||1993-09-25 17:22:00||49.1975 N, 12.74367 W||RV Belgica BG9322A|
|1271511||Water sample data||1993-09-25 17:57:00||49.1975 N, 12.74369 W||RV Belgica BG9322A|
|1271523||Water sample data||1993-09-25 20:18:00||49.23031 N, 12.79403 W||RV Belgica BG9322A|
|914969||CTD or STD cast||1993-10-21 08:46:00||49.18667 N, 12.81967 W||RV Pelagia PE093|
|908153||CTD or STD cast||1994-01-05 13:06:00||49.18333 N, 12.81 W||FS Meteor M27_1|
|908165||CTD or STD cast||1994-01-05 16:47:00||49.17 N, 12.79167 W||FS Meteor M27_1|
|444369||Currents -subsurface Eulerian||1994-01-11 08:41:00||49.1883 N, 12.795 W||FS Meteor M27_1|
|444370||Currents -subsurface Eulerian||1994-01-11 08:55:00||49.1883 N, 12.795 W||FS Meteor M27_1|
|908233||CTD or STD cast||1994-01-11 17:01:00||49.21167 N, 12.88333 W||FS Meteor M27_1|
|887362||CTD or STD cast||1994-04-16 06:51:00||49.4215 N, 12.7765 W||RRS Charles Darwin CD85|
|887301||CTD or STD cast||1994-04-18 03:36:00||49.1445 N, 12.7865 W||RRS Charles Darwin CD85|
|887313||CTD or STD cast||1994-04-18 05:53:00||49.16517 N, 12.768 W||RRS Charles Darwin CD85|
|444321||Currents -subsurface Eulerian||1994-04-18 13:56:00||49.1865 N, 12.8194 W||RRS Charles Darwin CD85|
|444308||Currents -subsurface Eulerian||1994-04-18 14:04:00||49.1865 N, 12.8194 W||RRS Charles Darwin CD85|
|887325||CTD or STD cast||1994-04-18 21:15:00||49.133 N, 12.82217 W||RRS Charles Darwin CD85|
|974033||CTD or STD cast||1994-05-25 13:50:00||49.194 N, 12.745 W||RRS Charles Darwin CD86|
|1663773||Water sample data||1994-05-25 14:24:00||49.19405 N, 12.74502 W||RRS Charles Darwin CD86|
|444394||Multiple data types -fixed platform||1994-06-30 22:15:00||49.1873 N, 12.8218 W||RRS Charles Darwin CD86|
|910378||CTD or STD cast||1994-09-16 02:37:00||49.18333 N, 12.845 W||FS Meteor M30_1|
|442941||Currents -subsurface Eulerian||1994-09-16 13:10:00||49.1912 N, 12.8 W||FS Meteor M30_1|
|442928||Currents -subsurface Eulerian||1994-09-16 13:14:00||49.1912 N, 12.8 W||FS Meteor M30_1|
|885275||CTD or STD cast||1995-06-12 23:00:00||49.2025 N, 12.8185 W||RRS Charles Darwin CD94|
|915008||CTD or STD cast||1995-08-21 06:15:00||49.1865 N, 12.8195 W||RV Pelagia PE95A|
|915162||CTD or STD cast||1995-09-18 19:37:00||49.18983 N, 12.74183 W||RV Pelagia PE95B|
|886475||CTD or STD cast||1995-10-01 04:24:00||49.19567 N, 12.811 W||RRS Discovery D217|
|886358||CTD or STD cast||1995-10-05 05:00:00||49.1875 N, 12.80517 W||RRS Discovery D217|
|886371||CTD or STD cast||1995-10-05 11:37:00||49.191 N, 12.84267 W||RRS Discovery D217|
|1676280||Water sample data||1995-10-05 12:39:00||49.19099 N, 12.84267 W||RRS Discovery D217|
|886383||CTD or STD cast||1995-10-05 14:53:00||49.1955 N, 12.85833 W||RRS Discovery D217|
|1676292||Water sample data||1995-10-05 15:07:00||49.19553 N, 12.85834 W||RRS Discovery D217|
|886229||CTD or STD cast||1995-10-14 05:20:00||49.19217 N, 12.8065 W||RRS Discovery D217|
|1676359||Water sample data||1995-10-14 05:35:00||49.19215 N, 12.80656 W||RRS Discovery D217|